Imidazole molecules have broad application in molecular
electronic
devices constructed with gold electrodes, but the formation mechanism
of gold–imidazole–gold molecular junctions has not been
elucidated so far. Herein, we carry out density functional theory
(DFT) calculations to investigate the deprotonation and binding mechanism
of imidazole on gold electrodes in water. Bulk solvation effects are
simulated by a polarized continuum model (PCM) augmented with explicit
water molecules. Our calculations show that the deprotonation of an
imidazole molecule weakly adsorbed on a gold surface via its pyrrole
nitrogen atom is an exothermic reaction with an energy barrier of
∼0.2 eV. Such a proton transfer process is catalyzed by the
strong gold–imidazole attraction presented in both the transition
state and the product, which not only lowers the energy barrier height
but also stabilizes the product. The deprotonated imidazole molecule
covalently binds to the gold electrode, and the negative charge resides
mainly on the gold surface converting it into an imidazole radical.
The subsequent hydrogen evolution reaction neutralizes the negatively
charged gold electrode and further enhances the Au–N covalent
bond formed at the gold–imidazole interface. At this point,
the imidazole radical adsorbed on gold is sufficiently stable and
also has a second binding site (the pyridine nitrogen atom) ready
for the formation of gold–imidazole–gold junction when
a second gold electrode approaches. Our findings provide an explanation
for the formation and stability of gold–imidazole–gold
molecular junctions and are also helpful for understanding other deprotonation
processes in water, especially in the presence of metal electrodes.