The inhibitory glycine receptor (GlyR) is a member of the ligand-gated ion channel receptor superfamily. Glycine activation of the receptor is antagonized by the convulsant alkaloid strychnine. Using in vitro mutagenesis and functional analysis of the cDNA encoding the al subunit of the human GlyR, we have identified several amino acid residues that form the strychnine-binding site. These residues were identified by transient expression of mutated cDNAs in mammalian (293) cells and examination of resultant [3H]strychnine binding, glycine displacement of [3Hlstrychnine, and electrophysiological responses to the application of glycine and strychnine. This mutational analysis revealed that residues from two separate domains within the al subunit form the binding site for the antagonist strychnine. The first domain includes the amino acid residues Gly-160 and Tyr-161, and the second domain includes the residues Lys-200 and Tyr-202. These results, combined with analyses of other ligand-gated ion channel receptors, suggest a conserved tertiary structure and a common mechanism for antagonism in this receptor superfamily.The inhibitory action of glycine in the spinal cord and brain stem is generated through activation of the glycine receptor (GlyR), with subsequent opening of the integral chloride channel. The GlyR complex, isolated from rat spinal cord, consists of two distinct subunits with apparent molecular masses of 48 kDa (a) and 58 kDa (J3), which associate to form a pentameric structure (for review, see ref. 1). Rat and human cDNAs encoding three different receptor a subunit subtypes and a, subunit have been cloned and sequenced (2-5). The predicted amino acid sequences and hydrophobicity profiles of these subunits are markedly similar to those of the y-aminobutyric acid type A receptor (GABAAR) subunits and also with the nicotinic acetylcholine receptor (nAChR) subunits, thus defining the ligand-gated ion channel receptor superfamily (2, 6, 7). The similarities among the various subunits of the GlyR, GABAAR, and the nAChR include amino acid sequence identity of between 20 and 35% and predicted topological features, such as a large amino-terminal extracellular domain containing a highly conserved disulfidebonded loop motif and four a-helical transmembrane domains, the latter forming the integral ion channel of this receptor superfamily.Inhibitory glycinergic neurotransmission is antagonized by the convulsive alkaloid strychnine (8). Young and Snyder (9,10) showed that [3H]strychnine could bind with high affinity (Kd = 2-12 nM) (9, 11) to membranes from rat spinal cord. This binding was displaced by glycine, 13-alanine, taurine, and f3-aminoisobutyric acid. Although the binding sites for glycine and strychnine are mutually interactive or overlapping,