Background:We examined the effect of deletion of the heavy chain regulatory region (RR) on VDJ recombination in B-cells. Results: V, D, and J usage is unaffected by the absence of the IgH RR. Conclusion: The IgH RR is dispensable for V(D)J diversity. Significance: This region only orchestrates IgH locus activity during late stages of B-cell differentiation.V(D)J recombination occurs during the antigen-independent early steps of B-cell ontogeny. Multiple IgH cis-regulatory elements control B-cell ontogeny. IGCR1 (intergenic control region 1), the DQ52 promoter/enhancer, and the intronic Emu enhancer, all three located upstream of Cmu, have important roles during V(D)J recombination, whereas there is no clue about a role of the IgH regulatory region (RR) encompassing the four transcriptional enhancers hs3a, hs1,2, hs3b, and hs4 during these early stages. To clarify the role of the RR in V(D)J recombination, we totally deleted it in the mouse genome. Here, we show that V(D)J recombination is unaffected by the complete absence of the IgH RR, highlighting that this region only orchestrates IgH locus activity during the late stages of B-cell differentiation. In contrast, the earliest antigen-independent steps of B-cell ontogeny would be under the control of only the upstream Cmu elements of the locus.Lymphopoiesis is coupled with programmed accessibility of Ig genes to transcription and to several major transcription-dependent DNA remodeling events (1, 2). During the antigenindependent step of B-cell ontogeny, the V(D)J recombination process within the IgH locus allows the assembly and expression of the functional heavy chain gene (3). Multiple cis-regulatory elements located 5Ј and 3Ј of constant genes control B-cell ontogeny. The intronic 5Ј E element is reported as a master control element of V(D)J recombination (4). Deletion of the 5Ј DQ52 element leads to a minor effect on V(D)J recombination and altered D gene usage (5, 6). Recently, IGCR1 (intergenic control region 1), which lies between the V H and D clusters, was reported to promote rearrangement of distal rather than D H -proximal V H segments (7,8). The IgH 3Ј regulatory region (3ЈRR) 4 that encompasses the four transcriptional enhancers hs3a, hs1,2, hs3b, and hs4 has been reported as the master element controlling class switch recombination (2, 9) and is also important for oncogene deregulation in B-cell lymphomagenesis (10, 11). Whereas physical chromosomal interactions have been reported in pro-B-cells between the 5Ј E enhancer and the 3ЈRR (12, 13) and whereas GFP transgenic mice highlighted that combination of 5Ј E and the 3ЈRR mimics the B-specific endogenous expression pattern of IgH genes from pro-B-cells to mature B-cells (14, 15), the potential contribution of the 3ЈRR to V(D)J recombination control has never been studied. Although bacterial artificial chromosome transgenes have been used to explore the role of the 3ЈRR in class switch recombination and somatic hypermutation (16, 17), they are inappropriate to test its role in V(D)J recombinatio...