Effects of each of three indigenous Lactobacillus groups on other bacterial populations were separately investigated in gnotobiotic rats. In the wall of the non-glandular part of the stomach, contents of the stomach and contents of the upper part of the small intestine, some pre-associated indigenous bacteria were reduced to conventional population levels by introducing three groups of lactobacilli : Group I (Lactobacillus acidophilus and related strains), Group II (L. fermentum) and the groups mixed. However, no obvious reduction in cell numbers of the pre-associated bacteria occurred in the case of Group III (L. murini).Lactobacilli are considered to be one of the most important members of the intestinal microflora of rats (6) and mice (2). The lactobacilli in conventional and gnotobiotic rats are most predominant in the stomach and the small intestine. In the cecum, rectum and feces, lactobacilli are also maintained at high population levels.We investigated localization of the indigenous lactobacilli at the species level in a previous report (11). In that report, it was revealed that the lactobacilli consisted of L. acidophilus and related strains, L. fermentum and L. murini, and furthermore these three groups of lactobacilli colonized differently in various parts of the gastrointestinal tract.On the other hand, populations of some indigenous bacteria such as E. coli, staphylococci, streptococci and bacteroides were suppressed in the stomach and the small intestine by the lactobacilli although mechanisms of this suppression are not yet known (6). Therefore, in this study, we investigated Lactobacillus suppression by preparing various gnotobiotic rats to which each of the Lactobacillus groups were separately administered in addition to pre-associated bacteria such as E. coli staphylococci, streptococci, bacteroides and fusiform bacteria. In this report, roles of each Lactobacillus group in the suppression are described by comparing bacterial flora of gnotobiotic rats containing lactobacilli with those of lactobacilli-free gnotobiotic and conventional rats.