The paper describes the process and the results of development of the dual-channel frequency meter, which function is to measure the output frequency generated by bottom-mounted pressure sensors. The sensors are actively used to monitor the marine environment. AVR family microcontrollers were used as the computing core of the presented device. This solution allows to obtain far lower power consumption, which is especially important when operating with no industrial power supply system in the coastal zone. As a result, we can deploy a reliable monitoring equipment capable of long-term saving data and if necessary transmit it for further processing. The developed frequency-meter is able to continually record the ambient temperature, atmospheric pressure and dynamically varying output frequency, which depends on hydrostatic pressure (sea level). To obtain more accurate data, we implemented a frequency measure method called reciprocal counter with lower relative error not affected by value of the output frequency. A laboratory experiment has been conducted, which confirms the suitability of the developed frequency meter for field-oriented conditions.