Candida
species are the most commonly isolated opportunistic fungal pathogens in humans.
Candida albicans
causes most of the diagnosed infections, closely followed by
Candida glabrata
.
C. albicans
is well studied, and many genes have been shown to be important for infection and colonization of the host. It is however less clear how
C. glabrata
infects the host. With the help of fungal RNA enrichment, we here investigated for the first time the transcriptomic profile of
C. glabrata
during urinary tract infection (UTI) in mice. In the UTI model, bladders and kidneys are major target organs and therefore fungal transcriptomes were addressed in these organs. Our results showed that, next to adhesins and proteases, nitrogen metabolism and regulation play a vital role during
C. glabrata
UTI. Genes involved in nitrogen metabolism were upregulated and among them we show that
DUR1,2
(urea amidolyase) and
GAP1
(amino acid permease) were important for virulence. Furthermore, we confirmed the importance of the glyoxylate cycle in the host and identified
MLS1
(malate synthase) as an important gene necessary for
C. glabrata
virulence. In conclusion, our study shows with the support of
in vivo
transcriptomics how
C. glabrata
adapts to host conditions.