To assess the relative proficiencies of enzymes that
catalyze the hydrolysis of internal and C-terminal
peptide bonds, the rates of the corresponding nonenzymatic reactions
were examined at elevated temperatures in
sealed quartz tubes, yielding linear Arrhenius plots. The results
indicate that in neutral solution at 25 °C, peptide
bonds are hydrolyzed with half-times of approximately 500 years for the
C-terminal bond of acetylglycylglycine,
600 years for the internal peptide bond of acetylglycylglycine
N-methylamide, and 350 years for the dipeptide
glycylglycine. These reactions, insensitive to changing pH or
ionic strength, appear to represent uncatalyzed attack
by water on the peptide bond. Comparison of rate constants
indicates very strong binding of the altered substrate
in the transition states for the corresponding enzyme reactions,
K
tx attaining a value of less than
10-17 M in
carboxypeptidase B. The half-life of the N-terminal peptide bond
in glycylglycine N-methylamide, whose
hydrolysis
might have provided a reference for assessing the catalytic proficiency
of an aminopeptidase, could not be determined
because this compound undergoes relatively rapid intramolecular
displacement to form diketopiperazine (t
1/2
∼ 35
days at pH 7 and 37 °C). The speed of this latter process
suggests an evolutionary rationale for posttranslational
N-acetylation of proteins in higher organisms, as a protection against
rapid degradation.