The role of p53 in primary effusion lymphoma (PEL) is complicated. The latency-associated nuclear antigen (LANA) of Kaposi's sarcoma-associated herpesvirus (KSHV) binds p53. Despite this interaction, we had found that p53 was functional in PEL, i.e., able to induce apoptosis in response to DNA damage (C. E. Petre, S. H. Sin, and D. P. Dittmer, J. Virol. 81:1912-1922, 2007), and that hdm2 was overexpressed. To further elucidate the relationship between LANA, p53, and hdm2, we purified LANA complexes from PEL by column chromatography. This confirmed that LANA bound p53. However, the LANA:p53 complexes were a minority compared to hdm2:p53 and p53:p53 complexes. The half-life of p53 was not extended, which is in contrast to the half-life of simian virus 40 T antigen-transformed cells. p53:p53, LANA:p53, and LANA:LANA complexes coexisted in PEL, and each protein was able to bind to its cognate DNA element. These data suggest that under normal conditions, p53 is inactive in PEL, thus allowing for exponential growth, but that this inactivation is driven by the relative stoichiometries of LANA, hdm2, and p53. If p53 is activated by DNA damage or nutlin-3a, the complex falls apart easily, and p53 exercises its role as guardian of the genome.Kaposi's sarcoma-associated herpesvirus (KSHV) is found in Kaposi's sarcoma (KS), primary effusion lymphoma (PEL), and tumors from patients with the plasmablastic variant of multicentric Castleman disease (MCD) (reviewed in reference 15). The latency-associated nuclear antigen (LANA) is encoded by open reading frame 73 (ORF 73) of the viral genome. It is expressed in every KSHV-infected cell during the latent as well as lytic phase of the viral life cycle. LANA is required for replication and maintenance of the viral DNA during latent infection (2, 13). Experimental abrogation of LANA expression through small interfering RNA (siRNA) or genomic knockout leads to loss of KSHV from latently infected cells, genetically demonstrating that LANA is necessary for maintenance of latency (28,103). LANA is a large protein composed of 1,162 amino acids (KSHV M type, reference sequence NC_003409). It has many known biochemical activities, and many more have yet to be determined. One way to think about LANA is as a nuclear scaffolding protein for viral DNA replication and transcription, analogous to the large T antigen of the polyomaviruses.We hypothesized that there exist multiple biochemically distinct LANA complexes in KSHV-infected PEL, as both LANA and its many potential interaction partners are present at physiological molar ratios to each other. Biochemical analysis of purified native complexes in PEL allowed us to establish that not all of LANA was part of a LANA:p53 complex and that not all of p53 was bound to LANA.The C terminus of the LANA protein has sequence-specific DNA binding activity. LANA can bind to a 20-bp repeated cis element in the terminal repeats (TRs) of the viral genome (3,26,27,45,50,78,85,101). We previously identified a similar cis element that was present as a single c...