Roses are among the most economically important ornamental plants worldwide. But prickles on the stem and leaves cause difficulties for cultivation or inconveniences during harvest and transportation, thus are an undesirable horticultural character. However, little is known about the molecular mechanisms of prickle development. In this study, we sought to develop Rosa multiflora (in the family Rosaceae) as a model plant to study prickle formation. The morphology, structure, and ontogeny of prickles were characterized, and transcriptome analysis of prickly and prickleless R. multiflora genotypes was performed. Morphological observation and microscopic analyses revealed that prickles of R. multiflora were non-glandular prickles (NGPs) and their maturation went through five developmental stages, which was accompanied by the accumulation of secondary metabolites such as lignin and anthocyanins. Comparative transcriptome analysis identified key pathways and hub genes potentially involved in prickle formation. Interestingly, among the differentially expressed genes (DEGs), several notable development and secondary metabolism-related transcription factors (TFs) including NAC, TCP, MYB, homeobox, and WRKY were up-regulated in prickly internodes. KEGG enrichment analysis indicated that DEGs were enriched in the pathways related to biosynthesis of secondary metabolites, flavonoids, and phenylpropanoids in the prickly R. multiflora. Our study provides novel insights into the molecular network underlying the regulation of prickle morphogenesis in R. multiflora, and the identified candidates might be applied to the genetic improvement of roses.
| INTRODUCTIONSpinescence, including thorns, spines, and prickles, is a plant trait referring to the presence of sharp appendages with disparate origins, which bears ecological, evolutionary, and biogeographic significance. From a functional perspective, thorns, spines, and prickles are of analogous structures which have been evolved into a defense against herbivory (Givnish et al. 1994;Grubb 1992;Hanley et al. 2007). In addition, certain types of spinescence may represent effective adaptation to stresses, such as aridity, low temperatures, or extreme shortwave radiation (Nobel 2003). From a morphological perspective, thorns are modified twigs, branches, or stems, while spines are modified leaves, leaf parts, or stipules and prickles are simply outgrowths of epidermal and in some cases cortical tissues which lack of vasculature (Coyner et al. 2005;Posluszny & Fisher 2000). Prickles are widely distributed in many plants, and they can be found on the stems, branches, leaves, and fruits. Common plants with prickles are found in Rosaceae, such as Rosa chinensis, Rosa rugosa, Rosa multiflora, and Rubus idaeus, in Solanaceae such as Solanum viarum and Solanum rostratum, in Araliaceae such as A. spinosa and in Rutaceae such as Zanthoxylum bungeanum.