The structure of the nucleocapsid protein of bunyaviruses has not been defined. Earlier we have shown that Tula hantavirus N protein oligomerization is dependent on the C-terminal domains. Of them, the helix-loophelix motif was found to be an essential structure. Computer modeling predicted that oligomerization occurs via helix protrusions, and the shared hydrophobic space formed by amino acids residues 380-IILLF-384 in the first helix and 413-LI-414 in the second helix is responsible for stabilizing the interaction. The model was validated by two approaches. First, analysis of the oligomerization capacity of the N protein mutants performed with the mammalian two-hybrid system showed that both preservation of the helix structure and formation of the shared hydrophobic space are crucial for the interaction. Second, oligomerization was shown to be a prerequisite for the granular pattern of transiently expressed N protein in transfected cells. N protein trimerization was supported by three-dimensional reconstruction of the N protein by electron microscopy after negative staining. Finally, we discuss how N protein trimerization could occur.Hantaviruses (genus Hantavirus, family Bunyaviridae) are known as the most widely distributed zoonotic viruses carried by rodents. They are enveloped viruses that contain a tripartite, negative-stranded RNA genome encoding an RNA-dependent RNA polymerase (L), two integral membrane glycoproteins (G1 and G2), and a nucleocapsid (N) protein.Hantaviruses are prime examples of emerging viruses and important human pathogens (5). Many rodent species carry hantaviruses which can be transmitted to humans by inhalation of aerosolized excreta.The N protein is the most abundant viral component in both virions and infected cells (5) and the major antigen in early serological response in humans (32). It has multiple functions in the viral replication cycle, e.g., during RNA synthesis and virus assembly. Although the three-dimensional structure of the N protein has not been solved yet, several functionally important regions have been defined, e.g., those involved in oligomerization and RNA binding. Most importantly, the N protein (amino acids 175 to 217 in Hantaan virus) (33) associates with viral RNA that is a prerequisite for ribonucleoprotein (RNP) formation (30,31). Hantavirus N protein has also been shown to associate with membranes via electrostatic interactions, and the C-terminal 141 amino acids were found to be responsible for the Golgi localization of Black Creek Canal hantavirus N protein in the perinuclear area (25).Recent findings suggest that, in infected cells, the N protein interacts with the L protein (13) and with the cytoplasmic tail of G1 glycoprotein (V. Koistinen, personal communication). These interactions are crucial for viral RNA transcription and replication and for virus assembly, respectively. The N protein is also able to serve some "ambassador" functions, interacting with cellular proteins. It interacts with actin filaments, which could transport newly synthesized v...