Recent studies provide a functional link between kallikrein 6 (Klk6) and the development and progression of disease in multiple sclerosis patients and in its murine models. To evaluate the involvement of additional kallikrein family members, we compared Klk6 expression to 4 other kallikreins (Klk1, Klk7, Klk8 and Klk10) in the brain and spinal cord of mice infected with Theiler’s murine encephalomyelitis virus (TMEV), an experimental model of progressive MS. The robust upregulation of Klk6 and Klk8 in the brain during the acute phase of viral encephalitis and in the spinal cord during disease development and progression points to their participation in inflammation, demyelination and progressive axon degeneration. More limited changes in Klk1, Klk7, and Klk10 were also observed. In addition, Klk1, Klk6, and Klk10 were dynamically regulated in T-cells in vitro as a recall response to viral antigen and in activated monocytes pointing to their activities in the development of adaptive and innate immune function. Together, these results point to overlapping and unique roles for multiple kallikreins in the development and progression of virus-mediated central nervous system inflammatory demyelinating disease, including activities in the development of the adaptive and innate immune response, in demyelination and in progressive axon degeneration.