2024
DOI: 10.1016/j.celrep.2024.114134
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The MYCN 5′ UTR as a therapeutic target in neuroblastoma

Marina P. Volegova,
Lauren E. Brown,
Ushashi Banerjee
et al.
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“…Future studies will also aim to define the set of mRNAs that are regulated by (−)-20 and related compounds via DDX3 in GBM stem cells using ribosome profiling, RNA Bindn-Seq, 41 and RNA-seq, 66,67 techniques which have been reported using rocaglates, and potentially PAR-CLIP, which has been used to identify binding between DDX3 and helix 16 on the human 40S ribosome 68 and to isolate RNA transcripts that copurify with endogenous eIF4A1 in MYCN-amplified neuroblastoma cells in the presence of an amidino rocaglate (ADR) derivative. 69 ■ METHODS Cell Culture. Glioblastoma stem cell lines GBM0308, BT145, and BT112 were cultured in neurobasal medium (NBE) (ThermoFisher Scientific) containing N-2 and B-27 supplements (ThermoFisher Scientific), EGF (Stem Cell Technologies), bFGF (Stem Cell Technologies), L-glutamine (ThermoFisher Scientific), and penicillin−streptomycin (Sigma-Aldrich) as described previously.…”
Section: ■ Conclusionmentioning
confidence: 99%
“…Future studies will also aim to define the set of mRNAs that are regulated by (−)-20 and related compounds via DDX3 in GBM stem cells using ribosome profiling, RNA Bindn-Seq, 41 and RNA-seq, 66,67 techniques which have been reported using rocaglates, and potentially PAR-CLIP, which has been used to identify binding between DDX3 and helix 16 on the human 40S ribosome 68 and to isolate RNA transcripts that copurify with endogenous eIF4A1 in MYCN-amplified neuroblastoma cells in the presence of an amidino rocaglate (ADR) derivative. 69 ■ METHODS Cell Culture. Glioblastoma stem cell lines GBM0308, BT145, and BT112 were cultured in neurobasal medium (NBE) (ThermoFisher Scientific) containing N-2 and B-27 supplements (ThermoFisher Scientific), EGF (Stem Cell Technologies), bFGF (Stem Cell Technologies), L-glutamine (ThermoFisher Scientific), and penicillin−streptomycin (Sigma-Aldrich) as described previously.…”
Section: ■ Conclusionmentioning
confidence: 99%