Background
RNA-directed regulation of epigenetic processes has recently emerged as an important feature of mammalian differentiation and development. Perturbation of this regulatory system in the brain may contribute to the development of neuropsychiatric disorders.
Methods
RNA sequencing (RNA-seq) was used to identify changes in the experience-dependent expression of long non-coding RNAs (lncRNAs) within the medial prefrontal cortex (mPFC) of adult mice. Transcripts were validated by real-time quantitative PCR and a candidate lncRNA, Gomafu, was selected for further investigation. The functional role of this schizophrenia-related lncRNA was explored in vivo by antisense oligonucleotide-mediated gene knockdown in the mPFC, followed by behavioral training and assessment of fear-related anxiety. LncRNA-directed epigenetic regulation of gene expression was investigated by chromatin and RNA immunoprecipitation assays.
Results
RNA-seq analysis revealed changes in the expression of a significant number of genes related to neural plasticity and stress, as well as the dynamic regulation of lncRNAs. In particular, we detected a significant down-regulation of Gomafu lncRNA. Our results revealed that Gomafu plays a role in mediating anxiety-like behavior, and suggest that this may occur through an interaction with a key member of the polycomb repressive complex 1, BMI1, which regulates the expression of the schizophrenia-related gene beta crystallin (Crybb1). We also demonstrated a novel role for Crybb1 in mediating fear-induced anxiety-like behavior.
Conclusion
Experience-dependent expression of lncRNAs plays an important role in the epigenetic regulation of adaptive behavior, and the perturbation of Gomafu may be related to anxiety and the development of neuropsychiatric disorders.