of new peptide-based tools for studying synaptic ribbon function. J Neurophysiol 106: 1028-1037, 2011. First published June 8, 2011 doi:10.1152/jn.00255.2011.-Synaptic ribbons are proteinaceous specialized electron-dense presynaptic structures found in nonspiking sensory cells of the vertebrate nervous system. Understanding the function of these structures is an active area of research (reviewed in Matthews G, Fuchs P. Nat Rev Neurosci 11: 812-822, 2010). Previous work had shown that ribbons could be effectively labeled and visualized using peptides that bind to the synaptic ribbon protein RIBEYE via a PXDLS motif (Zenisek D, Horst NK, Merrifield C, Sterling P, Matthews G. J Neurosci 24: [9752][9753][9754][9755][9756][9757][9758][9759] 2004). Here, we expand on the previous work to develop new tools and strategies for 1) better visualizing synaptic ribbons, and 2) monitoring and manipulating calcium on the synaptic ribbon. Specifically, we developed a new higher-affinity peptide-based label for visualizing ribbons in live cells and two strategies for localizing calcium indicators to the synaptic ribbon. exocytosis; hair cell; retina; synapse THE SYNAPTIC RIBBON IS A PRESYNAPTIC feature found in tonically releasing nonspiking cells of the retina, inner ear, and pineal gland. These proteinaceous structures localize nearby to clusters of voltage-gated calcium channels (Issa and Hudspeth 1996;Midorikawa et al. 2007;Morgans et al. 2005;Zenisek et al. 2004) and tether synaptic vesicles near sites of neurotransmitter release (Matthews and Fuchs 2010). Vesicles tethered to the ribbon itself likely make up most of the vesicles that undergo exocytosis in response to membrane potential changes (LoGiudice et al. 2008;Zenisek 2008). The most abundant protein of the synaptic ribbon is RIBEYE, a splice isoform of the transcriptional corepressor COOH-terminal binding protein 2 (CtBP2) (Schmitz et al. 2000). We previously showed that peptides containing a short sequence, known to bind to the closely homologous CtBP1 (Molloy et al. 1998), can be used as an effective label of synaptic ribbons in living cells when introduced into cells via a patch pipette (Zenisek et al. 2004). This peptide label has proven useful in a number of ribbonsynapse preparations (Bartoletti et al. 2010;Dumitrescu et al. 2009;Frank et al. 2009;LoGiudice et al. 2008;Midorikawa et al. 2007;Schnee et al. 2011). Here, we report new variants of the ribbon-binding peptide that offer the potential to extend the utility of the peptide for experimental use. Specifically, we report 1) two strategies for attaching calcium indicators to the synaptic ribbon, and 2) the synthesis of a ribbon label with higher-affinity and better ribbon detection capabilities.
MATERIALS AND METHODS
Peptide Synthesis and StorageThe peptides used for covalent conjugation of fluo-4 were synthesized, purified, and purchased from New England Peptide (Ͼ75% purity): X-rhod-binding peptides were synthesized, purified (75% purity), and purchased from GenScript (Piscataway, NJ). New England Pepti...