Introduction, hypothesis and objectives 1.1 General introduction The development of robust omic technologies (genomics, transcriptomics, proteomics, etc) to generate and understand genome-wide alterations is already having an impact on health care, with a particular relevance on cancer and oncology. Within the current context of Personalised Medicine, Precision Medicine and Genomic Medicine (Roden and Tyndale, 2013), modern cancer research has to be done considering an adecuate use of the large-scale data derived from these new omic technologies. Some of these technologies, such as transcriptomic expression proling, have been already applied to thousands of human samples (see public database GEO (NCBI, 2019)), and provide information about the expression status of all the known genes in the analised individuals. In order to be useful and applicable to medical research, such omic data should be integrated with the corresponding clinical data using adequate computational and bioinformatic tools and methods. This is a main framework where the current Doctoral Thesis work is proposed. Incidence of cancer in Europe With respect to the study in the area of cancer, the work in this PhD is done with 2 major types of cancer: Breast Cancer (BRCA) and ColoRectal Cancer (CRC). These cancer types are nowdays the most frequent in Europe, representing together the largest proportion of all cancers (https://ecis.jrc.ec.europa.eu/). In particular in Europe in 2018 the most common cancer types, according to the body location, were cancers of the female breast (523,000 cases), followed by colorectal (500,000), lung (470,000) and prostate cancer (450,000). The global numbers for Europe in 2018 estimated 3.91 million new cases of cancer and 1.93 million deaths from cancer (Ferlay et al., 2018). Since the European population is close to 513 millions, having each year about 4 million new cases and about 2 million deaths, cancer represents the second most important cause of death and morbidity in Europe. Considering just the specic numbers for breast cancer and colorectal cancer, the estimated incidence of these cancers in Europe in 2018 by country is presented 1 S. Bueno PhD 2019, Analyzing genome-wide expression & survival data from cancer patients in Figure 1.1, that shows the map of Europe coloured according to the level of such incidences in each country. It is quite remarkable that breast cancer has a higher impact in Holland and Belgium, and in some north countries like Sweden, Finland, Denmark, United Kingdom and Ireland. By contrast, colorectal cancer has a quite higher impact in some specic countries that are: Norway and Hungary. EUROPE: Estimated incidence of cancer by country Breast Cancer (BRCC) Both sexes, All ages, 2018 ColoRectal Cancer (CRC) Both sexes, All ages, 2018 Age standardised rate per 100.000 Age standardised rate per 100.