The nucleotide sequence of the genes coding for the S19 and L22 equivalent ribosomal proteins from <i>Halobacterium halobium</i>

Mankin, Alexander S.

doi:10.1016/0014-5793(89)80243-1

Cited by 16 publications

(3 citation statements)

References 17 publications

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“…71 O0 3-kb DNA sequence was the same as reported previously [13][14], although some minor differences were found probably because of the strain difference.…”

Section: T E P E G I C S D E D C P F It G N L S V R G Q V L E G E Vsupporting

confidence: 58%

Organization and nucleotide sequences of ten ribosomal protein genes from the region equivalent to the S10 operon in the archaebacterium, Halobacterium halobium

Miyokawa

Urayama

Shimooka

et al. 1996

TBMB

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SUMMARYA determination was made of the nucleotide sequence of the 7340-bp region of a ribosomal protein gene cluster of Halobacteriwn halobium, which is equivalent to the $10 operon of Escherichia coli. The sequence was analyzed with the codonpreference program deduced from the halobacterial codon usage table that showed a very high GC content of the third codon position. The sequence was comprised of a string of 13 tightly linked ORFs. Most of the ORFs were homologous with ribosomal protein genes (ORF1-ORF2-rp13-rp14-rp123--rp12-rps19-rp122-rps3-rp129-ORF11-rps17-rp114). The 13-gene string was preceded by three putative AT-rich promoter sequences. The order of the genes in H. halobium essentially agreed with that of the corresponding genes of E. coli (S10-operon), except for certain deletions or insertions of additional protein genes.

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“…71 O0 3-kb DNA sequence was the same as reported previously [13][14], although some minor differences were found probably because of the strain difference.…”

Section: T E P E G I C S D E D C P F It G N L S V R G Q V L E G E Vsupporting

confidence: 58%

Organization and nucleotide sequences of ten ribosomal protein genes from the region equivalent to the S10 operon in the archaebacterium, Halobacterium halobium

Miyokawa

Urayama

Shimooka

et al. 1996

TBMB

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“…Asterisks (*) indicate identities between all groups, plus signs (+) indicate identities between eubacterial and chloroplast groups, colons (:) indicate well-conserved amino acids (bold letters). Abbreviations: accession numbers and references are: Hma, Halobacterium marismortui J05222, P10970 [28]; Hha, Halobacterium halobium [29]; Ala, Acoh, plasma laidlawii M74771, P29222 [30]; Myc, Mycoplasma-like organism M74770 [31]; Bst, Bacillus stearothermophilus [32]; Tma, Thermotoga maritima Z21677 [33]; Eco, Escheriehia coli [34]; Tth, Thermus thermophilus (present work); Sol, Spinaeia oleracea X13336, P09594 [35]; Nta, Nicotiana tabacum [36]; Msa, Medieago sativa L00667; Mpo, Marehantiapolymorpha -X04465, P06388 [37]; Gte, Gracillaria tenuistipitata M32638, P16634; Egr, Euglenagracilis M37463, P19166 [38]; Zma, Zea mays -Y00329, P06589 [39]. among the majority of the eubacterial and chloroplast sequences are also conserved in archaebacteria.…”

Section: Resultsmentioning

confidence: 99%

Ribosomal protein L22 from Thermus thermophilus: sequencing overexpression and crystallisation

et al. 1995

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“…Numbering is with respect to the Petunia sequence. The S19 proteins aligned with the Petunia sequence are from the following: Escherichia coli (29), Mycoplasma capricolum (32), Cyanophora paradoxa cyanelle (33), Halobacterinum halobium from + 13 to the end (34), Euglena gracilis chloroplast (34), Marchantia polymorpha chloroplast (36), maize chloroplast (37), and tobacco chloroplast (38).…”

Section: S19 Protein Identification and Comparisonmentioning

confidence: 99%

Ribosomal protein S19 is encoded by the mitochondrial genome in Petunia hybrida

Conklin

Hanson

1991

Nucleic Acids Research

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The rps19 ribosomal protein gene, which has not been previously reported in any mitochondrial genome, was identified by sequence analysis in the mitochondrial DNA of the higher plant Petunia hybrida. According to the sequence of eight rpsl 9 cDNAs, seven C to U conversions with respect to the genomic sequence are present in rpsl 9 transcripts. Not all transcripts are fully edited at these seven sites. Six of the seven C to U conversions change the encoded amino acid sequence by altering four codons. The rpsl9 gene is located entirely within a repeat sequence which is present in three copies on the 443 kb genome. Due to intragenomic recombination across these repeats, Petunia rpsl9 is present in nine different genomic environments.

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The nucleotide sequence of the genes coding for the S19 and L22 equivalent ribosomal proteins from Halobacterium halobium

Cited by 16 publications

References 17 publications

Organization and nucleotide sequences of ten ribosomal protein genes from the region equivalent to the S10 operon in the archaebacterium, Halobacterium halobium

Organization and nucleotide sequences of ten ribosomal protein genes from the region equivalent to the S10 operon in the archaebacterium, Halobacterium halobium

Ribosomal protein L22 from Thermus thermophilus: sequencing overexpression and crystallisation

Ribosomal protein S19 is encoded by the mitochondrial genome in Petunia hybrida

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