Enzyme EngineeringEnzyme engineering brings our society with an excellent opportunity to advance. The use of these techniques in chemical and pharmaceutical industries has changed our world, and opens new possibilities [1]. Enzyme engineering techniques have been widely used in microorganisms, improving chemical processes due to their diversity in species, lifestyles and metabolic reactions, which make possible the discovery of new enzymes having new interesting characteristics (e.g. an enzyme with a known function more thermostable), or catalyzing new reactions [2]. Moreover, the expression of recombinant proteins in bacteria is routinely done.But in plants, the use of protein engineering techniques is very limited at this moment. Maybe the main reason of this has been the difficulty to make transgenic crop plants, and the limited number of full sequenced genomes compared to microorganisms until now. Although at present, it is possible to transform almost all crop plants [3], including some trees like poplar [4] and pine [5,6], and the number of full sequenced genomes of plant species is highly increased in the last years; thanks to next generation sequencing techniques [7]. In the present moment, we have enough technology to attend the protein engineering in plants.The plant domestication constituted the major revolution of all in the human history [8]. Now, the plants are essential for the humanity in different ways. They support the human nutrition, but also are the source of raw materials (wood, pulp, etc), chemicals (biofuels, etc) and pharmaceuticals (acetylsalicylic acid, etc). Nowadays, the human population is increasing, so the demands for food, combustible and raw materials are also increasing, which can cause short-medium term famine and scarcity [9]. The use of enzyme engineering techniques in plants could contribute to palliate these global problems by improving crop yield and qualities.
The Genome Era: Identification of New Genes/EnzymesThe genome era makes possible to identify new genes and protein functions, in a way never thought, until this moment. In plants, it is estimated that the number of protein of unknown function is higher than in the rest of organism, constituting over 50% of the total [10]. A great portion could encode for enzymes and transporters. Many of these proteins of unknown function are part of conserved families shared between bacteria, plants, and other eukaryotes [11]. On this way, the comparative genomics becomes an excellent tool to predict functions and guide experimental validation [10,12].In plants, this amount of proteins of unknown function can constitute a near unlimited source of new enzymes with new catalytic capacities, which can be used for enzyme and metabolic engineering. It is known that plants have an enormous chemical diversity, which confers a great potential to work with enzymes with new functions [13]. Obviously, the diversity of secondary metabolites in plants must be correlated with an exceptional number of enzymes catalyzing the synthesis and degra...