DNA sequence analysis of the complete M6 protein gene revealed 19 hydrophobic amino acids at the C terminus which could act as a membrane anchor and an adjacent proline-and glycine-rich region likely to be located in the cell wall. To define this region within the cell wall and its role in attaching the molecule to the cell, we isolated the cell-associated fragment of the M protein. Assuming that the cell-associated region of the M protein would be embedded within the' wall and thus protected from trypsin digestion, cells were digested with this enzyme, and the wall-associated M protein fragmnent was released by phage lysin digestion of the peptidoglycan. With antibody probes prepared to synthetic peptides of C-terminal sequences, a cell wallassociated M protein fragment (molecular weight, 16,000) was identified and purified. Amino acid sequence analysis placed the N terminus of the 16,000-molecular-weight fragment at residue 298 within the M sequence. Amino acid composition of this peptide was consistent with a C-terminal sequence lacking the membrane anchor. Antibody studies of nitrous acid-extracted whole bacteria suggested that, in addition to the peptidoglycan-associated region, a 65-residue helical segment of the C-terminal domain of the M protein is embedded within the carbohydrate moiety of the cell wall. Since no detectable amino sugars were associated with the wall-associated fragment, the C-terminal region of the M6 molecule is likely to be intercalated within the cross-linked peptidoglycan and not covalently linked to it. Because the C-terminal region of the M molecule is highly homologous to the C-terminal end of protein A from staphylococci and protein G from streptococci, it is likely that the mechanism of attachment of these proteins to the cell wall is conserved.M protein is an antiphagocytic molecule located on the surface of the group A streptococcal cell wall (21,31). From physicochemical and amino acid sequence analyses of the M5 (22), M6 (12, 16), and M24 proteins (2), it is clear that M protein is composed of two alpha-helical protein chains wound around each other to form a coiled-coil structure (12,27). Although the majority of structural and immunochemical data on the M protein is derived from an amino-terminal fragment released from the streptococcus by limited pepsin digestion (2,3,(22)(23)(24)27), information regarding the Cterminal portion of this molecule is beginning to emerge (12,16,17,19,20,28).DNA sequence analysis of the M6 gene revealed the complete amino acid sequence of this M molecule, which identified three different repeat regions (16). In addition, it revealed a region at the C-terminal end which is likely to be responsible for attaching the M molecule to the cell. This segment of the M protein contains a potential membrane anchor region composed of 19 hydrophobic amino acids with a charged tail probably extending into the cytoplasm. Adjacent to the membrane anchor is a proline-and glycine-rich region which is likely to be located within the cell wall. The nearly regula...