The Phylogenetic Implications of the Mitochondrial Genomes of Macropsis notata and Oncopsis nigrofasciata

Wang, Jiajia; Wu, Yunfei; Yang, Maofa; Dai, Ren–Huai

doi:10.3389/fgene.2020.00443

Cited by 21 publications

(24 citation statements)

References 49 publications

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“…Within the subfamily Cicadellinae, the phylogenetic relationships indicated that Cicadellinae was consistently a monophyletic group. This is different from the previous studies based on mitogenomes reported by Wang [30,33], which suggested Cicadellinae was not a monophyletic group. All of the ML and BI analyses suggested that the relationships within Cicadellinae were ((H. vitripennis + (Co. yasumatsui + Ci.…”

Section: Phylogenetic Analysescontrasting

confidence: 99%

“…The comparative analysis of these six phylogenetic trees showed that treehoppers share a common ancestor with the subfamilies Deltocephalinae, Iassinae, Coelidiinae, Macropsinae, Megophthalminae, Idiocerinae, Evacanthinae, Cicadellinae, Typhlocybinae, Ledrinae, and Mileewinae. The results of this study support the point that treehoppers are derived from paraphyletic Cicadellidae, which has been reported in former studies [30,37,38,[76][77][78]. Moreover, within the family Cicadellidae, some relationships were highly supported and constant.…”

Section: Phylogenetic Analysessupporting

confidence: 90%

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Characterization of Two Complete Mitochondrial Genomes of Atkinsoniella (Hemiptera: Cicadellidae: Cicadellinae) and the Phylogenetic Implications

Jiang

et al. 2021

Insects

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The complete mitochondrial genomes of Atkinsoniella grahami and Atkinsoniella xanthonota were sequenced. The results showed that the mitogenomes of these two species are 15,621 and 15,895 bp in length, with A+T contents of 78.6% and 78.4%, respectively. Both mitogenomes contain 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), 2 ribosomal RNA genes (rRNAs), and a control region (CR). For all PCGs, a standard start ATN codon (ATT, ATG, or ATA) was found at the initiation site, except for ATP8, for which translation is initiated with a TTG codon. All PCGs terminate with a complete TAA or TAG stop codon, except for COX2, which terminates with an incomplete stop codon T. All tRNAs have the typical cloverleaf secondary structure, except for trnS, which has a reduced dihydrouridine arm. Furthermore, these phylogenetic analyses were reconstructed based on 13 PCGs and two rRNA genes of 73 mitochondrial genome sequences, with both the maximum likelihood (ML) and Bayesian inference (BI) methods. The obtained mitogenome sequences in this study will promote research into the classification, population genetics, and evolution of Cicadellinae insects in the future.

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Section: Phylogenetic Analysescontrasting

confidence: 99%

Section: Phylogenetic Analysessupporting

confidence: 90%

Characterization of Two Complete Mitochondrial Genomes of Atkinsoniella (Hemiptera: Cicadellidae: Cicadellinae) and the Phylogenetic Implications

Jiang

et al. 2021

Insects

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“…The Olidiana mitogenomes contained similar start and stop codons, and most PCGs had the typical start codon ATN (ATA/ATT/ATG/ATC) and either TAR (TAA/TAG) or an incomplete (single T) stop codon ( Table S4 ). The presence of incomplete stop codons is a common feature of the mitochondrial genes among other leafhoppers, particularly of ATP8 , and these incomplete stop codons are most likely caused by post-transcriptional modifications during mRNA maturation ( Wang et al, 2018 ; Wang et al, 2019a ; Wang et al, 2019b ; Wang et al, 2019c ; Wang et al, 2020a ; Wang et al, 2020b ; Yuan et al, 2019 ).…”

Section: Resultsmentioning

confidence: 99%

“…In addition, all tRNAs exhibited a highly conserved, canonical cloverleaf secondary structure, except trnS1 (AGN), which lacked the stable dihydrouridine arm commonly found in most hemipterans ( Fig. 3 ) ( Cameron, 2014 ; Li et al, 2017b ; Wang, Li & Dai, 2017 ; Wang et al, 2018 ; Wang et al, 2019b ; Wang et al, 2019c ; Wang et al, 2020a ; Wang et al, 2020b ).…”

Section: Resultsmentioning

confidence: 99%

“…Previous studies that focused on morphological characteristics and molecular fragments ( H3 , 28S , and 12S ) showed that Coelidiinae is closely related to Cicadellinae, Evacanthinae, and Typhlocybinae ( Dietrich & Deitz, 1993 ; Dietrich et al, 2001 ; Dietrich, 2010 ). Furthermore, Wang et al (2019b) , Wang et al (2019c) , Wang et al (2020a) and Wang et al (2020b) reported that Coelidiinae and Iassinae form a clade at one branch and a sister group with Macropsinae. The phylogenetic relationships among members of Coelidiinae are inconsistent based on morphological characteristics and few published mitogenomes, and additional mitogenomes may provide a better understanding of the phylogenetic relationships among the genera and species of this subfamily and among members of Cicadellidae ( Dietrich et al, 2017 ).…”

Section: Introductionmentioning

confidence: 99%

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Mitogenomics of five Olidiana leafhoppers (Hemiptera: Cicadellidae: Coelidiinae) and their phylogenetic implications

Wang¹,

Wang²,

Dai³

2021

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Similar morphological characteristics and limited molecular data of Olidiana resulted in their unknown phylogenetic statuses and equivocal relationships. To further understand the genus Olidiana, we sequenced and annotated five Olidiana complete mitochondrial genomes (mitogenomes). Our results show that Olidiana mitogenomes range from 15,205 bp to 15,993 bp in length and include 37 typical genes (13 protein-coding genes, 22 tRNAs, and 2 rRNAs) and a control region. Their nucleotide composition, codon usage, features of control region, and tRNA secondary structures are similar to other members of Cicadellidae. We constructed the phylogenetic tree of Cicadellidae using the maximum likelihood (ML) and Bayesian inference (BI) methods based on all valid mitogenome sequences. The most topological structure of the obtained phylogenetic tree is consistent. Our results support the monophyletic relationships among 10 subfamilies within Cicadellidae and confirm Iassinae and Coelidiinae to be sister groups with high approval ratings. Interestingly, Olidiana was inferred as a paraphyletic group with strong support via both ML and BI analyses. These complete mitogenomes of five Olidiana species could be useful in further studies for species diagnosis, evolution, and phylogeny research within Cicadellidae.

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Comparison of mitogenomes of three Petalocephala species (Hemiptera: Cicadellidae: Ledrinae) and their phylogenetic analysis

Wang

et al. 2022

Arch Insect Biochem Physiol

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Ledrinae is a unique group of leafhoppers with a distinct appearance. Petalocephala is the largest Ledrinae genus that is difficult to identify except by dissecting the male genitals. To date, research on Ledrinae is relatively less compared with other leafhoppers. Therefore, to better understand this group, we sequenced and analyzed three complete Petalocephala mitochondrial genomes. We comparatively analyzed these general Petalocephala genomic features (including size, AT content, AT/GC skew, 13 protein-coding gene nucleotide compositions, etc.), and predicted 22 transfer RNA secondary structures. We obtained highly consistent phylogenetic results within Cicadellidae based on mitogenomic data using the maximum likelihood and Bayesian methods. Our results showed that all subfamilies were monophyletic and had a high node support rate, and there was a sister group relationship between Ledrinae and all other leafhopper groups. Furthermore, treehoppers were found to originate from leafhoppers and showed sister group relationships with Megophthalminae. Within Ledrinae, all phylogenetic trees supporting phylogenetic relationships were as follows: ([P. dicondylica + P. gongshanensis] + [Tituria pyramidata + [Ledra auditura + P. gongshanensis]]) Based on the complete

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The Phylogenetic Implications of the Mitochondrial Genomes of Macropsis notata and Oncopsis nigrofasciata

Cited by 21 publications

References 49 publications

Characterization of Two Complete Mitochondrial Genomes of Atkinsoniella (Hemiptera: Cicadellidae: Cicadellinae) and the Phylogenetic Implications

Characterization of Two Complete Mitochondrial Genomes of Atkinsoniella (Hemiptera: Cicadellidae: Cicadellinae) and the Phylogenetic Implications

Mitogenomics of five Olidiana leafhoppers (Hemiptera: Cicadellidae: Coelidiinae) and their phylogenetic implications

Comparison of mitogenomes of three Petalocephala species (Hemiptera: Cicadellidae: Ledrinae) and their phylogenetic analysis

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