Chemical abundances are an essential tool in untangling the Milky Way’s enrichment history. However, the evolution of the interstellar medium abundance gradient with cosmic time is lost as a result of radial mixing processes. For the first time, we quantify the evolution of many observational abundances across the Galactic disk as a function of lookback time and birth radius, $\rm \text{R}_\text{birth}$. Using an empirical approach, we derive $\rm \text{R}_\text{birth}$ estimates for 145,447 APOGEE DR17 red giant disk stars, based solely on their ages and $\rm [Fe/H]$. We explore the detailed evolution of 6 abundances (Mg, Ca (α), Mn (iron-peak), Al, C (light), Ce (s-process)) across the Milky Way disk using 87,426 APOGEE DR17 red giant stars. We discover that the interstellar medium had three fluctuations in the metallicity gradient ∼9, ∼6, and ∼4 Gyr ago. The first coincides with the end of high-α sequence formation around the time of the Gaia-Sausage-Enceladus disruption, while the others are likely related to passages of the Sagittarius dwarf galaxy. A clear distinction is found between present-day observed radial gradients with age and the evolution with lookback time for both [X/Fe] and [X/H], resulting from the significant flattening and inversion in old populations due to radial migration. We find the $\rm [Fe/H]$–$\rm [\alpha /Fe]$ bimodality is also seen as a separation in the $\rm \text{R}_\text{birth}$–$\rm [X/Fe]$ plane for the light and α-elements. Our results recover the chemical enrichment of the Galactic disk over the past 12 Gyr, providing tight constraints on Galactic disk chemical evolution models.