Summary
Members of the marine actinomycete genus Salinispora
constitutively produce a characteristic orange pigment during vegetative growth.
Contrary to the understanding of widespread carotenoid biosynthesis pathways in
bacteria, Salinispora carotenoid biosynthesis genes are not
confined to a single cluster. Instead, bioinformatic and genetic investigations
confirm that four regions of the S. tropica CNB-440 genome,
consisting of two gene clusters and two independent genes, contribute to the
in vivo production of a single carotenoid. This compound,
namely
(2’S)-1’-(β-D-glucopyranosyloxy)-3’,4’-didehydro-1’,2’-dihydro-φ,ψ-caroten-2’-ol,
is novel and has been given the trivial name “sioxanthin”.
Sioxanthin is a C40-carotenoid, glycosylated on one end of the
molecule and containing an aryl moiety on the opposite end. Glycosylation is
unusual amongst actinomycete carotenoids, and sioxanthin joins a rare group of
carotenoids with polar and non-polar head groups. Gene sequence homology
predicts that the sioxanthin biosynthetic pathway is present in all of the
Salinispora as well as other members of the family
Micromonosporaceae. Additionally, this study’s investigations of
clustering of carotenoid biosynthetic genes in heterotrophic bacteria show that
a non-clustered genome arrangement is more common than previously suggested,
with nearly half of the investigated genomes showing a non-clustered
architecture.