2020
DOI: 10.20944/preprints202002.0146.v1
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The Reuse of Public Datasets in the Life Sciences: Potential Risks and Rewards

Abstract: The 'big data revolution' has enabled novel types of analyses in the life sciences, facilitated by public sharing and reuse of datasets. Here, we review the prodigious potential of reusing publicly available datasets and the challenges, limitations and risks associated with it. Due to the prominence, abundance and wide distribution of sequencing results, we focus on the reuse of publicly available sequence datasets. Through selected examples of successful reuse of different data (genome, transcriptome, proteom… Show more

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Cited by 2 publications
(2 citation statements)
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“…Despite high complexity of the p53 proteins family, modern methods of comparative genomics provide useful tools to explore protein variations in closely related species, and to correlate the extracted molecular information with lifespan [74]. According to Sahin and DePinho, the hyperactivity of p53 in the presence of accumulated DNA damage and ROS is one of the main causes of aging [41].…”
Section: Discussionmentioning
confidence: 99%
“…Despite high complexity of the p53 proteins family, modern methods of comparative genomics provide useful tools to explore protein variations in closely related species, and to correlate the extracted molecular information with lifespan [74]. According to Sahin and DePinho, the hyperactivity of p53 in the presence of accumulated DNA damage and ROS is one of the main causes of aging [41].…”
Section: Discussionmentioning
confidence: 99%
“…Not using standards makes it difficult to share and reuse parts. [31][32][33][34][35][36] Therefore, the time and effort required to find parts is much greater, and the ability to use the tools to automate design is limited.…”
Section: Introductionmentioning
confidence: 99%