Parkinson's disease (PD) is a degenerative disorder that affects the central nervous system. PD-related alterations in structural and functional neuroimaging have not been fully explored. This study explored multi-modal PD neuroimaging and its application for predicting clinical scores on the Movement Disorder Society-sponsored Unified Parkinson's Disease Rating Scale (MDS-UPDRS). Multi-modal imaging that combined 123 I-Ioflupane single-photon emission computed tomography (SPECT) and diffusion tensor imaging (DTI) were adopted to incorporate complementary brain imaging information. SPECT and DTI images of normal controls (NC; n = 45) and PD patients (n = 45) were obtained from a database. The specific binding ratio (SBR) was calculated from SPECT. Tractography was performed using DTI. Group-wise differences between NC and PD patients were quantified using SBR of SPECT and structural connectivity of DTI for regions of interest (ROIs) related to PD. MDS-UPDRS scores were predicted using multi-modal imaging features in a partial least-squares regression framework. Three regions and four connections within the cortico-basal ganglia thalamocortical circuit were identified using SBR and DTI, respectively. Predicted MDS-UPDRS scores using identified regions and connections and actual MDS-UPDRS scores showed a meaningful correlation (r = 0.6854, p < 0.001). Our study provided insight on regions and connections that are instrumental in PD.Parkinson's disease (PD) is a degenerative disorder of the central nervous system that mainly affects the motor system 1 . PD-related deaths were expected to increase by 28.2% from 43.7 thousand deaths in 1990 to 102.5 thousand deaths in 2013 2 . In most patients, PD is idiopathic with little evidence of pathophysiology 3 . The most obvious symptoms are movement-related, such as rigidity, shaking, and slowness of movement 4 . These symptoms are associated with a loss of dopaminergic neurons in the substantia nigra (SN) and those that project to the striatum 5,6 . This dopamine imbalance causes inhibition of basal ganglia output and dysfunction within the cortico-basal ganglia thalamocortical (CBGT) circuit that consists of the associative cortex, limbic cortex, sensorimotor cortex, caudate, putamen, thalamus, and pallidum 5,6 .Single-photon emission tomography (SPECT) is commonly used for PD diagnosis 7 . SPECT imaging using 123 I-Ioflupane ( 123 I-Ioflupane-SPECT) provides information based on local binding of presynaptic dopamine transporters (DaTs) with 123 I-Ioflupane, which has been shown to be highly correlated with PD progression 7,8 . This binding measure is quantitative and assesses the spatial distribution of dopamine transporters. Furthermore, 123 I-Ioflupane-SPECT is an imaging modality that is capable of differentiating between PD and essential tremor 9 . SPECT imaging can also distinguish between PD and drug-induced Parkinsonism 9,10 . However, any disease that causes loss of the presynaptic dopamine neurons will appear as abnormal compared with normal controls (NCs) 11 . ...