“…Keywords are considered to reflect high-frequency hot spots in a particular field ( Lin et al., 2022 ). We also conducted a comprehensive analysis of the co-cited references and categories, and summarized the research hot spots as follows: 1) Inflammatory bowel disease and CDI ( Cammarota et al., 2017 ), principally including ulcerative colitis ( Costello et al., 2019 ; Matsuoka, 2021 ), and Crohn’s disease ( Bak et al., 2017 ; Sokol et al., 2020 ), also including constipation ( Ge et al., 2017 ; Zhang et al., 2021 ), and diarrhea ( Dai et al., 2019 ); 2) Complementary and alternative treatment of several metabolic diseases, such as obesity ( Allegretti et al., 2020 ; Yu et al., 2020 ), type 2 diabetes ( Wang et al., 2019a ), metabolic syndrome ( Mocanu et al., 2021 ); 3) Adjuvant tumor immunotherapy, mainly to reduce drug toxicity and modulate the immune response ( Chang et al., 2020 ; Baruch et al., 2021 ); 4) Developmental disorders and psychological diseases, mainly related to the treatment of children’s autism ( Kang et al., 2019 ) and the relief of symptoms of depression and anxiety ( Kilinçarslan and Evrensel, 2020 ; Rao et al., 2021 ); 5) Transplantation mode and action mechanisms, such as in vitro sorting of transplanted microorganisms ( Zhang et al., 2020 ), and short-chain fatty acid and bile acid metabolism ( Seekatz et al., 2018 ); 6) Potential indications and risk assessment ( Lagier and Raoult, 2016 ; Gupta et al., 2021 ), and the utilization of standardized fecal sample banks ( Kragsnaes et al., 2020 ).…”