Aim:To explore nucleoside/nucleotide analogues resistance mutations in hepatitis B virus (HBV) reverse transcriptase (RT) domain from non-responder Pakistani patients. Methods: Blood samples were taken from 20 chronic HBV patients who were non-responders to different nucleoside/nucleotide analogues. HBV DNA was extracted and a fragment of genome including RT domain was sequenced. The sequence was aligned with wild type HBV sequences and compared with resistant mutations in the RT domain. Results: Resistant mutations were detected in samples of 13 (65%) patients who were non-responders to more than one drug. The mutations were found at amino acid positions rt80, rt135, rt169, rt173, rt180, rt181, rt184 and rt204 and rt248. Mutations rtY135S and rtN248H were detected from 13 (65%) and 12 (60%) samples respectively. Mutations rtL180M and rtA181V were present in 6 (30%) samples, rtM204V and rtV173L in 5 (25%) samples while rtI169P, rtL80G and rtT184Y were identified from 3 (15%), 2 (10%) and 1 (5%) sample respectively. Conclusion: Nucleoside /Nucleotide analogues resistant mutations rt135, rtL180M, rtA181V, rtM204V, rtV173L and rtN248H are frequent in HBV strains isolated from non-responder Pakistani patients while mutations rtI169P, rtL80G and rtT184Y are also present in low proportion.
Key words:Hepatitis B virus, resistant mutations, reverse transcriptase, nucleos(t)ide analogues, Pakistan
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