SummaryAdequate sleep is critical for development and facilitates the maturation of the neurophysiological circuitries at the basis of cognitive and behavioural function. Observational research has associated early life sleep problems with worse later cognitive, psychosocial, and somatic health outcomes. Yet, the extent to which day‐to‐day sleep behaviours (e.g., duration, regularity) in early life relate to non‐rapid eye movement (NREM) neurophysiology—acutely and the long‐term—remains to be studied. We measured sleep behaviours in 32 healthy 6‐month‐olds assessed with actimetry and neurophysiology with high‐density electroencephalography (EEG) to investigate the association between NREM sleep and habitual sleep behaviours. Our study revealed four findings: first, daytime sleep behaviours are related to EEG slow‐wave activity (SWA). Second, night‐time movement and awakenings from sleep are connected with spindle density. Third, habitual sleep timing is linked to neurophysiological connectivity quantified as delta coherence. And lastly, delta coherence at 6 months predicts night‐time sleep duration at 12 months. These novel findings widen our understanding that infants’ sleep behaviours are closely intertwined with three particular levels of neurophysiology: sleep pressure (determined by SWA), the maturation of the thalamocortical system (spindles), and the maturation of cortical connectivity (coherence). The crucial next step is to extend this concept to clinical groups to objectively characterise infants’ sleep behaviours ‘at risk’ that foster later neurodevelopmental problems.