This research used the geostatistical analysis of snow cover samples taken in 2017–2022 in the Baikal basin. Groups of snow cover pollution sources were identified by the method of empirical Bayesian kriging (ArcMap software) and mathematical data processing. The studied area was divided into fourteen districts. Geovisualization of marker substances accumulated in the snow cover allowed for the zoning of the studied area according to the degree of anthropogenic load. It was revealed that the atmospheric pollution of the territory from local sources extended for tens of kilometers along the prevailing wind direction. The maximum concentrations of anthropogenic aerosols in the snow cover were determined in towns that were sources of pollution and near settlements located on the coast of Lake Baikal and at the Selenga River mouth. The industrial centers of the region and the southern basin of Baikal, being affected by the air emissions from the Irkutsk agglomeration, were determined to be the most susceptible to anthropogenic pollution. The middle and northern basins could be attributed to the background regions being affected only by local heating sources and the natural background. The main atmospheric pollutants and the areas of their distribution were established. The main sources of snow cover pollution in the region, in addition to the natural background, were emissions from thermal power plants and motor vehicles.