We previously showed, using differential expression screening and in situ hybridization that Vanin-1, which encodes a glycosylphosphatidylinositol-linked membrane-associated pantetheinase, is expressed in a sexspecific manner during fetal gonad development in mice (Bowles, J., Bullejos, M., and Koopman, P. (2000) Genesis 27, 124 -135). In the present study we investigate in detail the expression and regulation of Vanin-1 in the fetal testis. Vanin-1 is co-expressed with the transcription factors steroidogenic factor-1 (SF-1) and SOX9 in Sertoli cells and, at a lower level, with SF-1 in Leydig cells in developing testes. SF-1 is able to activate the transcription of the Vanin-1 promoter in in vitro reporter assays, and this activation is further augmented by SOX9. We found that SF-1 is able to bind to two sites in the Vanin-1 promoter, whereas SOX9 can bind to a single interposed site defined by DNA footprinting. Mutation of the SF-1 or SOX9 sites disrupts the binding of these factors and activation of transcription. The expression of Vanin-1 was abolished in Leydig cells of a mouse mutant lacking SF-1 in that cell type. Our findings account for the sexand cell-type-specific expression of Vanin-1 in the developing mouse gonad in vivo, which we suggest is required to provide an appropriate environment for male germ cell development.Male and female gonads, although structurally and functionally quite distinct tissues, arise in the embryo from the same tissue primordia, the genital ridges. Their developmental trajectories begin to diverge about 10.5 days post coitum (dpc) 1 in mice, when Sry expression in XY genital ridges initiates testis determination. Many genes that operate downstream of Sry have been identified as being expressed male-specifically during sex determination and gonad differentiation, but little is known about how they are regulated, interact, and function within the overall scheme of sex differentiation.SRY is the eponymous founding member of the Sox (SRYrelated HMG box) gene family, encoding a group of proteins that bind to DNA in a sequence-specific manner via their HMG (high mobility group) domain (1). Immediately following Sry induction the expression of SOX9, another member of the SOX family, is up-regulated in male genital ridges. Transgenic mouse studies have shown that expression of SOX9 is sufficient for testis formation (2), whereas mutations in human SOX9 can result in XY sex reversal (3). These observations show that SOX9 is a key transcription factor in the male sex determination pathway.