“…The Intercropping systems showed an increase in beneficial microorganisms ( Pseudomonas, Sphigomonas, Streptomyces, Nocardioides , and SWB02 ) ( Supplementary Table S3 , Figure 4 ), as other authors have observed in different intercropping systems (Yu et al, 2019 ; Zhao et al, 2022 ) Sphingomonas promote nitrogen fixation and dehydrogenation (Leys et al, 2004 ) and has also been found to increase plant growth hormone production (Asaf et al, 2020 ). Some species of Pseudomonas can enhance nutrient uptake and thus plant growth (Franke-Whittle et al, 2015 ; Lami et al, 2020 ) SWB02 , on the other hand, has been linked to the capacity to oxidize nitrite to nitrate (Fumasoli et al, 2015 ; Gao et al, 2021 ), while Niastella ( Supplementary Figure 4B ) can mitigate N 2 0 emissions (Nishizawa et al, 2014 ) Aeromicrobium ( Supplementary Figures 4A , B ) has been linked to plant biomass (Nuzzo et al, 2020 ) and has a greater capability to produce secondary compounds with antimicrobial capacities (Miller et al, 1991 ). These bacteria were highly correlated with TN, TOC, and pH at both sampling times ( Supplementary Figure 2 ).…”