During parasitological surveys of marine fishes and zooplankton in localities of the Northwestern Pacific coast of Mexico, 28 Gafftopsail pompano (Trachinotus rhodopus Gill) and 50 mysid crustaceans (Metamysidopsis frankfiersi Hendrickx & Hernández-Payán) we identified to be infected with adults and cystacanths, respectively of an acanthocephalan morphologically corresponding to the genus Rhadinorhynchus Lühe, 1911. DNA sequences of the small (SSU) and large (LSU) subunits of ribosomal DNA, and cytochrome c oxidase subunit 1 (cox 1) from mitochondrial DNA were obtained. Phylogenetic analyses revealed that the newly sequenced individuals in a clade with Rhadinorhynchus sp. from carangids in other localities of the Pacific coast of Mexico; together, all these individuals formed an independent lineage that is recognized herein as a new species, Rhadinorhynchus trachinotin. sp. The new species is morphologically distinguished from the other 38 congeners by having a long and cylindrical proboscis armed with 12 longitudinal rows bearing 16–18 hooks each. The ecological information gathered from the parasites, together with genetic evidence, confirms that the Gafftopsail pompano is the definitive host of R. trachinotin. sp., while mysid crustaceans serve as the intermediate host. Current records also indicate that R. trachinotin. sp. is distributed along the Pacific coast of Mexico, from Mazatlán, Sinaloa in the north to Puerto Angel, Oaxaca in the south. This distribution aligns with the Mexican Coastal Current, which extends from the Gulf of Tehuantepec in Oaxaca to the entrance of the Gulf of California and southern Baja California.