Nonphotochemical quenching (NPQ) is the fundamental process by which plants exposed to high light intensities dissipate the potentially harmful excess energy as heat. Recently, it has been shown that efficient energy dissipation can be induced in the major light-harvesting complexes of photosystem II (LHCII) in the absence of protein-protein interactions. Spectroscopic measurements on these samples (LHCII gels) in the quenched state revealed specific alterations in the absorption and circular dichroism bands assigned to neoxanthin and lutein 1 molecules. In this work, we investigate the changes in conformation of the pigments involved in NPQ using resonance Raman spectroscopy. By selective excitation we show that, as well as the twisting of neoxanthin that has been reported previously, the lutein 1 pigment also undergoes a significant change in conformation when LHCII switches to the energy dissipative state. Selective two-photon excitation of carotenoid (Car) dark states (Car S 1 ) performed on LHCII gels shows that the extent of electronic interactions between Car S 1 and chlorophyll states correlates linearly with chlorophyll fluorescence quenching, as observed previously for isolated LHCII (aggregated versus trimeric) and whole plants (with versus without NPQ).The photosynthetic process starts with the absorption of incoming solar photons by specialized pigment-protein complexes. In plants, light energy is absorbed by the two multisubunit protein-cofactor complexes, photosystem I (PSI) 3 and photosystem II (PSII), and the excitation energy is efficiently transferred to their reaction centers where photochemistry takes place. When these organisms are in low light environments, the process of light energy collection is extremely efficient. However, this process is regulated when the incoming light energy is above that which can be used in electron transport. In these latter conditions, the light-harvesting antenna is able to switch into a photoprotective mode, dissipating the excess energy as heat (1-3). This regulatory mechanism is measured as nonphotochemical quenching of chlorophyll (Chl) fluorescence (NPQ). In higher plants NPQ is a multicomponent process whose major component is called qE (energy-dependent quenching) (4), dependent upon the formation of the proton gradient (⌬pH) across the thylakoid membrane (which itself results from photosynthetic activity) (5). qE is facilitated by the deepoxidation of violaxanthin to zeaxanthin in the xanthophyll cycle (6). The PsbS protein also plays a crucial role in this process, possibly acting as a pH sensor (7,8). A key characteristic of the qE process is that it is induced in seconds and thus cannot involve de novo protein synthesis, but rather corresponds to a reorganization of the existing photosynthetic architecture.In the past decade a large amount of work has been performed to gain insight in the molecular mechanism(s) underlying this process, and several hypotheses have been put forward (9 -12). Among these, it was in particular proposed that excitation e...