Theoretical study of the neuromedin U-8 (NmU-8) neuropeptide from porcine spinal cord

Alieva, I. N.; Isakova, Nigar A; Gojayev, N.M.

doi:10.1016/j.molstruc.2004.05.008

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2006

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“…Along with the total energy of a conformation, energy contributions of backbone interactions, interactions within a residue, interactions between side chains and backbone-side chain interactions were considered. The basic principles of the calculation model are presently confirmed by calculations of peptide molecules and of a number of protein fragments and are supported by experimental evidence [18][19][20][21].…”

Section: Methodsmentioning

confidence: 65%

Conformational Features of the Dippu-AST 8 Neuropeptide from the Cockroach Diploptera punctata

Alieva¹,

Велиева²,

Musayev³

et al. 2006

PPL

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Spatial structure and conformational properties of the Dippu-AST 8 (allatostatin III) neuropeptide have been investigated by the molecular mechanics method. The conformational energy and geometrical parameters corresponding to the low-energy states of the molecule are obtained. A single backbone conformation with a very restricted set of Ser 3, Phe 4 and Leu 9 amino acids positions is observed for Dippu-AST 8 neuropeptide.

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Section: Methodsmentioning

confidence: 65%