We have previously identified Trp 14 as a critical residue that stabilizes the kink in the boomerang structure of the influenza fusion domain and found that cells expressing hemagglutinin with a Trp 14 to Ala mutation cannot fuse with red blood cells. However, mutating another aromatic residue, Phe 9 , on the other side of the kink did not have a significant effect on fusion or the ability of the mutant fusion peptide to bind to or perturb the bilayer structure of lipid model membranes. We reasoned that Phe is not as potent to contribute to the kink as the larger Trp and that the cooperation of Phe 9 and Ile 10 might be needed to elicit the same effect. Indeed, the double mutant F9A/I10A diminished cell-cell fusion and the ability of the fusion domain to bind to and perturb lipid bilayers in a similar fashion as the W14A mutant. A structure determination of F9A in lipid micelles by solution NMR shows that F9A adopts a similarly kinked structure as wild type. Distances between the two arms of the boomerang structure of wild type, F9A, W14A, and F9A/I10A in lipid bilayers were measured by double electron-electron resonance spectroscopy and showed that the kinks of W14A and F9A/I10A are more flexible than those of wild type and F9A. These results underscore the importance of large hydrophobic residues on both sides of the kink region of the influenza hemagglutinin fusion domain to fix the angle of the boomerang structure and thereby confer fusion function to this critical domain.Enveloped viruses enter host cells by membrane fusion. Influenza virus, as an example, first attaches to the plasma membrane of the host cell, and the virus is then taken up by the host cell by receptor-mediated endocytosis. When the pH in the endosome decreases to around 5, influenza hemagglutinin (HA) 2 on the viral envelope undergoes a dramatic conformational change, which triggers fusion of the viral and endosome membranes. Each monomer of the HA homotrimer consists of two subunits, HA1 and HA2. While HA1 is responsible for receptor recognition, HA2, which also anchors HA in the viral membrane, is responsible for membrane fusion. The fusion domain or fusion peptide of HA consists of a relatively hydrophobic sequence located at the N terminus of the HA2 subunit.Under resting condition at neutral pH, the fusion domains are buried in hydrophobic pockets at the interfaces between monomers in the HA trimer. However, under acidic conditions, the fusion domains become exposed and insert into the endosomal target membrane of the host cell, where they initiate fusion. A single fusion site is thought to consist of several HA trimers. Thus, multiple fusion domains are suggested to work cooperatively to merge the two membranes. In addition to these fusion domain-lipid interactions, the pH-induced conformational change also tilts the coiled-coil rods of HA2 relative to the two membranes and thereby drags them into close proximity (1). Some current models of HA-mediated membrane fusion suggest that there are interactions between the transmembrane and...