Acyltransferases isolated from Pseudomonas
protegens (PpATase) and Pseudomonas fluorescens (PfATase)
have recently been reported to catalyze
the Friedel–Crafts acylation, providing a biological version
of this classical organic reaction. These enzymes catalyze the cofactor-independent
acylation of monoacetylphloroglucinol (MAPG) to diacetylphloroglucinol
(DAPG) and phloroglucinol (PG) and have been demonstrated to have
a wide substrate scope, making them valuable for potential applications
in biocatalysis. Herein, we present a detailed reaction mechanism
of PpATase on the basis of quantum chemical calculations,
employing a large model of the active site. The proposed mechanism
is consistent with available kinetics, mutagenesis, and structural
data. The roles of various active site residues are analyzed. Very
importantly, the Asp137 residue, located more than 10 Å from
the substrate, is predicted to be the proton source for the protonation
of the substrate in the rate-determining step. This key prediction
is corroborated by site-directed mutagenesis experiments. Based on
the current calculations, the regioselectivity of PpATase and its specificity toward non-natural substrates can be rationalized.