2022
DOI: 10.1007/978-1-0716-2409-8_14
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Three-Dimensional Atlas of the Human Amygdala Subnuclei Constructed Using Immunohistochemical and Ultrahigh-Field Magnetic Resonance Imaging Data

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“…The amygdala was segmented into the lateral, basal, accessory basal, central (Ce), corticoamygdaloid transition area (CTA), medial, cortical, paralaminar nuclei, and the anterior amygdaloid area (AAA, Figure 1 ). Individual amygdala subnuclei segmentations were further visually inspected using ITK-SNAP ( http://www.itksnap.org/ ) ( Seguin et al, 2022 ). Volumes from the FreeSurfer automatic segmentation of the amygdala subnuclei were extracted into a spreadsheet using an in-house software available on the Developing Brain Lab github website: ( https://github.com/DevelopingBrainLab/amygdala_segmentation_Freesurfer ).…”
Section: Methodsmentioning
confidence: 99%
“…The amygdala was segmented into the lateral, basal, accessory basal, central (Ce), corticoamygdaloid transition area (CTA), medial, cortical, paralaminar nuclei, and the anterior amygdaloid area (AAA, Figure 1 ). Individual amygdala subnuclei segmentations were further visually inspected using ITK-SNAP ( http://www.itksnap.org/ ) ( Seguin et al, 2022 ). Volumes from the FreeSurfer automatic segmentation of the amygdala subnuclei were extracted into a spreadsheet using an in-house software available on the Developing Brain Lab github website: ( https://github.com/DevelopingBrainLab/amygdala_segmentation_Freesurfer ).…”
Section: Methodsmentioning
confidence: 99%