Aims. To explore the impact of surface inhomogeneities on stellar spectra, granulation models need to be computed. Ideally, the most fundamental characteristics of these models should be carefully tested before applying them to the study of more practical matters, such as the derivation of photospheric abundances. Our goal is to analyze the particular case of a K-dwarf. Methods. We construct a three-dimensional radiative-hydrodynamic model atmosphere of parameters T eff = 4820 K, log g = 4.5, and solar chemical composition. Using this model and 3D spectrum synthesis, we computed a number of Fe i and Fe ii line profiles.The observations presented in the first paper of this series were used to test the model predictions. The effects of stellar rotation and instrumental imperfections are carefully taken into account in the synthesis of spectral lines. shifts for our reference star, HIP 86 400, shows excellent agreement, with the exception of the core wavelength shifts of the strongest features, for which we suspect inaccurate theoretical values. Since this limitation does not affect the predicted line equivalent widths significantly, we consider our 3D model validated for photospheric abundance work.