This paper focuses on finding efficient solutions for the design of a highly permeable pile spur (or slit type) dike field used in morphologically dynamic alluvial rivers. To test the suitability of different arrangements of this type of permeable pile spur dike field, laboratory experiments were conducted, and a three-dimensional multiphase numerical model was developed and applied, based on the experimental conditions. Three different angles to the approach flow and two types of individual pile position arrangements were tested. The results show that by using a series of slit-type spurs, the approach velocity of the flow can be considerably reduced within the spur dike zone. Using different sets of angles and installation positions, this type of permeable spur dike can be used more efficiently than traditional dikes. Notably, this type of spur dike can reduce the longitudinal velocity, turbulence intensity, and bed shear stress in the near-bank area. Additionally, the deflection of the permeable spur produces more transverse flow to the opposite bank. Arranging the piles in staggered grid positions among different spurs in a spur dike field improves functionality in terms of creating a quasi-uniform turbulence zone while simultaneously reducing the bed shear stress. Finally, the efficacy of the slit-type permeable spur dike field as a solution to the riverbank erosion problem is numerically tested in a reach of a braided river, the Brahmaputra–Jamuna River, and a comparison is made with a conventional spur dike field. The results indicate that the proposed structure ensures the smooth passing of flow compared with that for the conventional impermeable spur structure by producing a lower level of scouring (low bed shear stress) and flow intensification.