Mutations in VHL, which encodes von Hippel-Lindau tumor suppressor (VHL), are associated with divergent diseases. We describe a patient with marked erythrocytosis and prominent mitochondrial alterations associated with a severe germline VHL deficiency due to homozygosity for a novel synonymous mutation (c.222C→A, p.V74V). The condition is characterized by early systemic onset and differs from Chuvash polycythemia (c.598C→T) in that it is associated with a strongly reduced growth rate, persistent hypoglycemia, and limited exercise capacity. We report changes in gene expression that reprogram carbohydrate and lipid metabolism, impair muscle mitochondrial respiratory function, and uncouple oxygen consumption from ATP production. Moreover, we identified unusual intermitochondrial connecting ducts. Our findings add unexpected information on the importance of the VHL-hypoxia-inducible factor (HIF) axis to human phenotypes. (Funded by Associazione Italiana Ricerca sul Cancro and others.) O xygen-sensing pathways orchestrate phenotypic adjustments from the cellular to the whole-body level, allowing function and survival under a variety of conditions. 1 The hypoxic response is exquisitely sensitive and dynamic, with relatively small changes in oxygen availability initiating transcriptional and post-transcriptional responses. 2 A fundamental process in this pathway is the ubiquitination and subsequent degradation of the hypoxia-inducible factors (HIFs), processes that are mainly regulated by the oxygen-and iron-dependent activity of the prolyl hydroxylase domain (PHD) enzymes and that require von Hippel-Lindau tumor suppressor (VHL). 3 VHL encodes four different isoforms (pVHL-213, pVHL-160, pVHL-172, and pVHL-X1). 4 Mutations leading to VHL loss of function result in a number of diseases with divergent features. 5 These diseases include the VHL syndrome, an inherited disorder due to germline VHL alterations that lead to a predisposition to the development, on a somatic second hit, of a variety of tumors and fluid-filled sacs (cysts) in several body regions 6 ; sporadic tumors, such as cerebellar hemangioblastomas, pheochromocytomas, and clear-cell renal-cell carcinoma 7,8 ; and familial erythrocytosis type 2, caused by a biallelic germline VHL mutation (canonically c.598C→T [R200W], causing Chuvash polycythemia) that results in increased expression of HIF target genes. 9 Different sporadic VHL mutations have been reported 10 in addition to the canonical R200W mutation; some of these mutations are as