Positive selection of CD8 T cells in the thymus is thought to be a multistep process lasting 3-4 d; however, the discrete steps involved are poorly understood. Here, we examine phenotypic changes, calcium signaling, and intrathymic migration in a synchronized cohort of MHC class I-specific thymocytes undergoing positive selection in situ. Transient elevations in intracellular calcium concentration ([Ca 2+ ] i ) and migratory pauses occurred throughout the first 24 h of positive selection, becoming progressively briefer and accompanied by a gradual shift in basal [Ca 2+ ] i over time. Changes in chemokine-receptor expression and relocalization from the cortex to medulla occurred between 12 and 24 h after the initial encounter with positive-selecting ligands, a time frame at which the majority of thymocytes retain CD4 and CD8 expression and still require T-cell receptor (TCR) signaling to efficiently complete positive selection. Our results identify distinct phases in the positive selection of MHC class I-specific thymocytes that are distinguished by their TCR-signaling pattern and intrathymic location and provide a framework for understanding the multistep process of positive selection in the thymus.Zap70 | thymic slice | two photon microscopy D eveloping thymocytes test their newly formed T-cell antigen receptors (TCRs) for their ability to bind self-peptide:major histocompatibility complex (MHC) complexes on thymic support cells. This process encompasses both positive and negative selection and ultimately leads to the formation of a functional and self-tolerant mature T-cell repertoire. During positive selection, CD4 + CD8 + [double positive (DP)] thymocytes with TCRs weakly reactive to self-peptide:MHC complexes receive signals to survive, mature, and give rise to CD4 or CD8 single positive (SP) cells. Positive selection requires close contact with thymic stromal cells and occurs over a period of several days (1-4). However, much of our information about T-cell development is based on analyses of steady-state thymocyte populations, and the individual steps that occur during the prolonged process of positive selection remain obscure.Thymocytes are highly motile within three-dimensional thymic tissue environments, and positive selection is tightly linked to thymocyte migration. The initial encounters with positive-selecting ligands on cortical thymic epithelial cells do not induce strong migratory stop signals, but instead occur as brief migratory pauses associated with transient elevations in intracellular calcium concentration ([Ca 2+ ] i ) (5-7). These brief, serial TCR signals are consistent with indications that positive selection is driven by weak recognition of self-peptide:MHC complexes and with the unique ability of DP thymocytes to respond to low-potency ligands (8, 9). However, there are also indications that thymocytes that have already received TCR signals still require further signaling to complete positive selection (10, 11). Thus, although the encounters with positive-selecting ligands last for...