Large areas of the seafloor in the Laptev Sea consist of submarine permafrost, which has experienced intense degradation over the last decades and centuries. Thermal abrasion of the submarine permafrost results in upward advection of suspended matter, which could reach the surface layer in shallow areas. This process is visually manifested through increased turbidity of the sea surface layer, which is regularly detected in optical satellite imagery of the study areas. In this study, satellite data, wind and wave reanalysis, as well as in situ measurements are analyzed in order to reveal the main mechanisms of seafloor erosion in shallow areas of the Laptev Sea. We describe the synoptic variability in erosion at the Vasilyevskaya and Semenovskaya shoals in response to wind and wave conditions. Finally, using reanalysis data, daily suspended matter flux from this area was evaluated during ice-free periods in 1979–2021, and its seasonal and inter-annual variabilities were described. The obtained results contribute to our understanding of subsea permafrost degradation, the sediment budget, and carbon and nutrient cycles in the Laptev Sea.