2009
DOI: 10.5858/133.6.973
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Tissue Floaters and Contaminants in the Histology Laboratory

Abstract: Context.—Anatomic pathology diagnosis is often based on morphologic features. In recent years, an appropriate increased attention to patient safety has led to an emphasis on improving maintenance of patient identity. Decreasing or eliminating cross-contamination from one specimen to another is an example of a patient identity issue for which process improvement can be initiated. Objective.—To quantify the presence of cross-contamination from histology water baths and the slide stainers. … Show more

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Cited by 31 publications
(9 citation statements)
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“…In the anatomic pathology laboratory, contaminating tissue may be present in the paraffin block or on the glass slide. 6 In the molecular laboratory, contamination can occur during the complex process of multiplexed library preparation either during manual or automated pipetting, or it can be a result of reagent impurity, such as the adapter contamination issue in our laboratory. Some massively parallel sequencing technologies are prone to index switching and cross-library contamination.…”
Section: Discussionmentioning
confidence: 99%
See 1 more Smart Citation
“…In the anatomic pathology laboratory, contaminating tissue may be present in the paraffin block or on the glass slide. 6 In the molecular laboratory, contamination can occur during the complex process of multiplexed library preparation either during manual or automated pipetting, or it can be a result of reagent impurity, such as the adapter contamination issue in our laboratory. Some massively parallel sequencing technologies are prone to index switching and cross-library contamination.…”
Section: Discussionmentioning
confidence: 99%
“…This rate of allogeneic contamination would be compatible with a reported 8% rate of contamination during histologic slide preparation. 6 We further evaluated how the detection of contamination affected reporting in 262 cases with greater than 5% contamination (Figure 7). A total of 147 cases (147 of 7571; 1.9%) were reported without modification.…”
Section: Application To Cancer Ngsmentioning
confidence: 99%
“…The main difficulties and/or errors in the diagnosis include the transfer of a tissue floater or tissue contaminant to the slide during tissue processing [46][47][48]. Recut of the paraffin block and observing deeper levels of the tissue usually solve the problem.…”
Section: (B) Gh In Colonic Tubular Adenomamentioning
confidence: 99%
“…This dataset is structured to mimic retrieval tasks in clinical practice. The patch-to-scan classification may appear trivial but has relevant clinical applications such as "floater detection" where we need to find the origin of a foreign tissue [26,18,25]. To generate the training and test datasets, Babaie et al [1] slide a window with no overlapping over each WSI to crop patches of size 1000×1000 and ignored background patches by analyzing both homogeneity and gradient change of each patch.…”
Section: Introductionmentioning
confidence: 99%