Background
For the microorganisms on the paper surface, the lack of water is one of the most important stress factors. A strain of Bacillus megaterium FDU301 was isolated from plaques on the paper surface using the culture medium with polyethylene glycol 200 (PEG200) to simulate arid condition. Global transcriptomic analysis of B. megaterium FDU301 grown under normal and the simulated arid conditions was performed via RNA-seq technology to identify genes involved in arid stress adaptation.
Results
The transcriptome of B. megaterium FDU301 grown in LB medium under arid (15% PEG200 (w/w)) and normal conditions were compared. A total of 2941 genes were differentially expressed, including 1422 genes up-regulated and 1519 genes down-regulated under arid conditions. Oxidative stress-responsive regulatory genes perR, fur, and tipA were significantly up-regulated, along with DNA protecting protein (dps), catalase (katE). Genes related to Fe2+ uptake (feoB), spore formation stage II (spoIIB, spoIIE, spoIIGA), small acid-soluble spore protein (sspD), and biosynthesis of compatible solute ectoine (ectB, ectA) were also highly expressed to various degrees. Meanwhile, oxidative phosphorylation-related genes (atpB, atpE, atpF, atpH, atpA, atpG, atpD, atpC) and glycolysis-related genes (pgk, tpiA, frmA) were significantly down-regulated.
Conclusion
This is the first report about transcriptomic analysis of a B. megaterium to explore the mechanism of arid resistance. Major changes in transcription were seen in the arid condition simulated by PEG200 (15%), with the most important one being the genes related to oxidative stress. The results showed the complex mechanism for bacteria to adapt to arid stress.