Enzymatic mild acidolysis lignins (EMAL) isolated from different species of softwood and Eucalyptus globulus were submitted to comparative analysis that included thioacidolysis, derivatization followed by reductive cleavage (DFRC), and DFRC followed by quantitative 31 P NMR (DFRC/ 31 P NMR). While gas chromatography (GC) was used to determine the monomer yields from both thioacidolysis and DFRC, 31 P NMR studies quantified the various phenolic hydroxy groups released by DFRC. The monomer yields from thioacidolysis and DFRC were substantially different, with thioacidolysis resulting in higher yields. In contrast, an excellent agreement was obtained in the total number of -aryl ether structures determined by thioacidolysis and DFRC/ 31 P NMR, indicating that the combination of DFRC with quantitative 31 P NMR overcomes, at least in part, the limitations presented by the DFRC method. Both thioacidolysis and DFRC/ 31 P NMR were further used to better understand the lignin isolation process from wood. The results show that mild rotary ball milling minimizes, but does not prevent, the degradation of -O-4 structures during the early stages of wood pulverization. The extent of such degradation was found to be higher for E. globulus than for a variety of softwoods examined. Furthermore, the structures of the EMALs isolated at yields ranging from 20% to 62% were very similar, indicating structural homogeneity in the lignin biopolymer within the secondary wall.Lignin is a complex and irregular natural polymer built up of different interunit linkages. 1 While the bulk of lignin in wood consists of nonphenolic -aryl ether units, other units, such as phenylcoumaran ( -5), resinol ( -), and dibenzodioxocins (5-5/ -O-4, R-O-4), are also present in lower amounts within the lignin macromolecule. 1,2 According to the current understanding, almost all lignin macromolecules in softwood and softwood pulps are covalently linked to polysaccharides, mainly hemicelluloses. 3,4 A primary problem in elucidating lignin structure has been the isolation of total lignin from wood in a chemically unaltered form. 5-9 Overall, two approaches have been used to isolate lignin from lignocellulosics: acidolysis methods 10,11 and extraction of lignin after ball milling. 5,6,12 Despite resulting in lignin preparations with high yields and purities, severe acid concentrations (usually 0.2 M) trigger some changes in lignin structure. 10,11 On the other hand, traditional ball-milling-based methods, such as the milled wood lignin (MWL) and cellulolytic enzyme lignin (CEL) protocols, offer less modified lignin than those obtained by severe acid treatments. However, the yields of such lignins are dependent on milling intensity. [7][8][9]13 Intensive milling protocols offered by vibratory-and orbital-milling devices provide higher lignin yields within relatively short milling intervals, although at the expense of the integrity of the lignin macromolecule and associated condensation and oxidation reactions. 8,9,13,14 Low-intensity milling minimizes structural c...