Toxoplasma gondii is a ubiquitous parasite that persists for the life of a healthy mammalian host. A latent, chronic infection can reactivate upon immunosuppression and cause life-threatening diseases, such as encephalitis. A key to the pathogenesis is the parasite's interconversion between the tachyzoite (in acute infection) and bradyzoite (in chronic infection) stages. This developmental switch is marked by differential expression of numerous, closely related surface proteins belonging to the SRS (SAG1-related sequence) superfamily. To probe the functions of bradyzoite-specific SRSs, we created a bioluminescent strain lacking the expression of SRS9, one of the most abundant SRSs of the bradyzoite stage. Imaging of mice intraperitoneally infected with tachyzoites revealed that during an acute infection, wild-type and ⌬srs9 strains replicated at similar rates, disseminated systemically following similar kinetics, and initially yielded similar brain cyst numbers. However, during a chronic infection, ⌬srs9 cyst loads substantially decreased compared to those of the wild type, suggesting that SRS9 plays a role in maintaining parasite persistence in the brain. In oral infection with bradyzoite cysts, the ⌬srs9 strain showed oral infectivity and dissemination patterns indistinguishable from those of the wild type. When chronically infected mice were treated with the immunosuppressant dexamethasone, however, the ⌬srs9 strain reactivated in the intestinal tissue after only 8 to 9 days, versus 2 weeks for the wild-type strain. Thus, SRS9 appears to play an important role in both persistence in the brain and reactivation in the intestine. Possible mechanisms for this are discussed.Toxoplasma gondii is an intracellular protozoan parasite that can infect a wide range of mammalian hosts. The parasite switches between two different developmental forms in its intermediate hosts: the tachyzoite, which rapidly divides and disseminates during an acute infection; and the bradyzoite, which encysts and persists in tissues. One hallmark of the Toxoplasma developmental switch is the differential expression of numerous, closely related glycophosphatidylinositol-anchored surface proteins belonging to the SRS (SAG1-related sequence) superfamily (Ͼ160 putative genes) (10). Nucleotide sequence identity can be 20 to 90%, depending on subfamilies. SAG1, the most abundant SRS antigen, is specific to the tachyzoite stage and serves as a prototype (22). The majority of SRS antigen genes are ϳ1.5 kb in length, lack introns, and are found scattered throughout the genome in tandemly arrayed multigenic clusters with intergenic distances ranging typically from 1.5 to 2.5 kb (10). The transcription start site is in the same orientation for every gene within a cluster, indicating that these clusters have probably arisen through gene duplication. For the majority of SRS sequences for which multiple expressed sequence tags exist, mRNA expression is developmentally regulated such that tachyzoites and bradyzoites express largely nonoverlapping sets of mu...