IntroductionMantle cell lymphoma (MCL) represents a distinct clinicopathologic entity that comprises approximately 3% to 10% of nonHodgkin lymphomas. [1][2][3] The malignant cells are derived from primary lymphoid follicles and mantle zones of secondary follicles. 4,5 The median survival time is 3 to 5 years and cure is not achieved with current treatment options. 2,[6][7][8][9][10][11] The chromosomal translocation t(11;14)(q13;q32) is characteristic of MCL. This aberration leads to the juxtaposition of the cyclin D1 (CCND1) gene and the immunoglobulin heavy-chain promoter resulting in an overexpression of CCND1. 12,13 CCND1 plays an important role in cell cycle regulation, inducing G 1 -S phase transition by binding to cyclin-dependent kinases. Therefore, increased CCND1 expression is likely to contribute to lymphomagenesis. 14 However, in transgenic mice, overexpression of CCND1 was not sufficient for the induction of B-cell lymphomas. Additional, so-called secondary genetic aberrations, as, for example, Mycn or Mycl activation, resulted in the rapid development of lymphomas in these mice. 15,16 Apart from CCND1 overexpression, a number of other cell cycle regulators were demonstrated to have an altered expression pattern in MCL. Examples are decreased expression of the cyclindependent kinase inhibitors (CKIs) p16 INK4a and p27, or increased expression of the cyclin-dependent kinases CDK2 and CDK4. [17][18][19] Similarly, genes involved in the regulation of apoptosis and in DNA repair were found to be aberrantly expressed.For the comprehensive analysis of secondary genomic aberrations in MCL, several studies using chromosomal banding analysis [20][21][22] and comparative genomic hybridization (CGH) were performed. [23][24][25][26][27] In contrast to other lymphomas, a high complexity of the karyotype was found. In addition, a characteristic pattern of secondary aberrations (eg, gains on 3q and deletions on 1p, 8p, and 11q) was described. Due to the limited spatial resolution of CGH (approximately 10 megabase pairs [Mbp] for low copy number gains and losses), 28 smaller aberrations may have been missed. Also, for most genomic aberrations the characterization of critical regions was not sufficiently accurate to allow the identification of candidate genes.To overcome these limitations we used the novel technique of matrix-CGH. [29][30] For the detection of genomic aberrations in 53 MCLs, an array containing 812 different DNA probes was designed. With this approach, a genome-wide screening with high spatial resolution was possible.
Patients and methods
PatientsBetween 1984 and 2001 peripheral blood samples (n ϭ 22), lymph node specimens (n ϭ 27), lymphomatous tonsil specimens (n ϭ 1), lymphomatous splenic specimens (n ϭ 1), pleural effusions (n ϭ 1), or bone marrow The publication costs of this article were defrayed in part by page charge payment. Therefore, and solely to indicate this fact, this article is hereby marked ''advertisement'' in accordance with 18 U.S.C. section 1734. For personal use only. on April...