␥-Glultamylcysteine synthetase (␥-GCS) catalyzes the first step in the de novo biosynthesis of glutathione. In trypanosomes, glutathione is conjugated to spermidine to form a unique cofactor termed trypanothione, an essential cofactor for the maintenance of redox balance in the cell. Using extensive similarity searches and sequence motif analysis we detected homology between ␥-GCS and glutamine synthetase (GS), allowing these proteins to be unified into a superfamily of carboxylateamine/ammonia ligases. The structure of ␥-GCS, which was previously poorly understood, was modeled using the known structure of GS. Two metal-binding sites, each ligated by three conserved active site residues (n1: Glu-55, Glu-93, Glu-100; and n2: Glu-53, Gln-321, and Glu-489), are predicted to form the catalytic center of the active site, where the n1 site is expected to bind free metal and the n2 site to interact with MgATP. To elucidate the roles of the metals and their ligands in catalysis, these six residues were mutated to alanine in the Trypanosoma brucei enzyme. All mutations caused a substantial loss of activity. Most notably, E93A was able to catalyze the L-Glu-dependent ATP hydrolysis but not the peptide bond ligation, suggesting that the n1 metal plays an important role in positioning L-Glu for the reaction chemistry. The apparent K m values for ATP were increased for both the E489A and Q321A mutant enzymes, consistent with a role for the n2 metal in ATP binding and phosphoryl transfer. Furthermore, the apparent K d values for activation of E489A and Q321A by free Mg 2؉ increased. Finally, substitution of Mn 2؉ for Mg 2؉ in the reaction rescued the catalytic deficits caused by both mutations, demonstrating that the nature of the metal ligands plays an important role in metal specificity.Glutathione (␥-glutamyl-cysteinyl-glycine) is a tripeptide thiol that acts as a sulfhydryl buffer. It is present in mammalian cells at high concentrations and plays an important role in many cellular processes, such as detoxification of oxidative species, protein and DNA synthesis, and cellular import of amino acids (1, 2). The parasitic protozoa Trypanosoma brucei causes African sleeping sickness, a disease responsible for significant morbidity and mortality in Africa. The identification of metabolic differences between parasite and host is an important step in the development of new anti-trypanosomal agents (3). Mammals and trypanosomes differ in their metabolism of glutathione. Trypanosomes utilize a unique molecule that is a conjugate of glutathione and spermidine, called trypanothione, to maintain reduced thiol pools in the cell (4). The first committed step in the biosynthesis of glutathione, and thereby trypanothione, is the formation of ␥-glutamylcysteine, catalyzed by ␥-glutamylcysteine synthetase (␥-GCS) 1 (5). ␥-GCS is the rate-limiting enzyme in the synthesis of glutathione in mammalian cells (6) and of trypanothione in the trypanosomatid, Leishmania tarentolae (7).␥-GCS catalyzes the formation of a peptide bond between the ␥-car...