“…It is not clear at the moment to what extent overlapping sets of substrates are involved in ATM signaling in response to DNA double strand breaks compared with ATM signaling in response to oxidative stress damage response; HMGA1, high mobility group AT-hook 1 protein; UIMCI/RAP80, BRCA1-A complex subunit RAP80 protein; HDGF, Hepatoma-derived growth factor; Ccdc82, Coiled-coil domain-containing protein 82; OSR1, Oxidative Stress Responsive 1 protein kinase; Mre11, Double-strand break repair protein MRE11A (Meiotic recombination 11 homolog 1); Rad50, DNA repair protein RAD50; NBN, Nibrin, Nijmegen breakage syndrome protein 1; MRN, MRE11-RAD50-NBN complex; PEX5, Peroxisomal targeting signal 1 receptor; DNA-PK, DNA-dependent protein kinase, catalytic subunit; SMG1, Serine/threonine-protein kinase SMG1; PP5, Serine/threonine-protein phosphatase 5; PP2A, Protein phosphatase 2A; PP2C, Protein phosphatase 2C; WIP1, Protein phosphatase 1D; Tip60/KAT5, Histone acetyltransferase KAT5; hMOF, Histone acetyltransferase KAT8; KU55933, 2-(4-Morpholinyl)-6-(1-thianthrenyl)-4H-pyran-4-one; U2OS,human osteosarcoma cell line; LKB1,Serine/threonine-protein kinase STK11; AMPK,AMP-activated protein kinase; TSC2,Tuberin; mTORC1, mammalian target of rapamycin complex 1; Akt, Protein kinase B; 4E-BP1, Eukaryotic translation initiation factor 4E-binding protein 1; NEMO,NF-kappa-B essential modulator; TRAF6, TNF receptor-associated factor 6; Hsp27, Heat shock protein beta-1; HIF1a, Hypoxia-inducible factor 1-alpha; VAMP2, Vesicle-associated membrane protein 2; KAP1, Transcription intermediary factor 1-beta; SMC1, Structural maintenance of chromosomes protein 1; H2AX, Histone H2AX; TCEAL3/6, Transcription elongation factor A proteinlike 3; ATE1, Arginyl-tRNA-protein transferase 1; METTL16, Methyltransferase-like protein 16; WNK1, Serine/threonine-protein kinase WNK1; STRING, Search Tool for the Retrieval of Interacting Genes/ Proteins database; EEA1, Early endosome antigen 1; MAPK1/ ERK2, Mitogen-activated protein kinase 1; MAPK3/ERK1, Mitogenactivated protein kinase 3; PRAS40, Proline-rich AKT1 substrate 1; RPTOR, Regulatory-associated protein of mTOR; UREB1, E3 ubiquitin-protein ligase HUWE1; UFD1L, Ubiquitin fusion degradation protein 1 homolog; ATXN3, Ataxin-3; MON1, Vacuolar fusion protein MON1 homolog A; TGF, Transforming growth factor beta; PPM1G, Protein phosphatase 1G; NKCC1, Solute carrier family 12 member 2 protein; NKCC2, Na-K-2Cl cotransporter; NCC, sodium-chloride symporter. (31,32). Indeed, a long-standing debate in the A-T field is the relative contributions of DNA double strand breaks and oxidative stress to neurodegeneration and neuronal cell death (33,34).…”