A careful computer analysis of the location of positively charged residues in the tandem amphipathic helical domains of human apoA-I shows the preponderance of arginine (Arg) residues on the right hand side of the polar face of the amphipathic helix ( 1 ). Because HDL particles containing apoA-I are major carriers of antioxidant enzymes ( 2 ), and the analysis of putative HDL-associating regions of paraoxonase 1 (PON1) showed the presence of clusters of aromatic amino acids ( 3 ), we hypothesized that the side-specifi c Arg residues in human apoA-I are involved in cation-interactions with the aromatic residues present in the putative HDL binding region of PON1 ( 1 ).We have shown that the interfacial lysine (Lys) residues in the class A amphipathic helical peptide 2F are in different microenvironments with sidedness in their pKa values; Lys residues located on the left hand side have lower pKa value than the Lys residues located on the right hand side of the amphipathic helix ( 4 ). In addition, we have shown that the apoA-I mimetic peptides are arranged in discoidal complexes in a head-to-tail manner in which the Lys residues with higher pKa values likely interact with phosphate in the lipid head group and Lys residues possessing lower pKa values are present in a more hydrophobic environment ( 5 ). Because Arg residues in apoA-I are predicted to be involved in cation-interactions with PON1 ( 1 ), we tested the hypothesis that side-specifi c incorporation of Arg residues in the apoA-I mimetic peptide 4F results in peptides that exhibit differential biological properties. Thus, we synthesized (as shown in Fig. 1 ) two additional analogs of 4F, a peptide that has been extensively studied for its various anti-infl ammatory properties by us as well as