The genomes of Chlamydia spp. encode a family of putative outer membrane proteins, referred to as polymorphic outer membrane proteins (POMPs), which may play a role in the avoidance of host immune defenses. We analyzed avian strain 6BC of Chlamydia psittaci by polyacrylamide gel electrophoresis for the expression of POMPs. At least six putative POMPs were identified on the basis of their size (90 to 110 kDa) and labeling with an outer membrane-specific probe, 3-(trifluoromethyl)-3-(m-[ 125 I]iodophenyl)diazirine. Three of the putative POMPs reacted with antiserum raised against a recombinant ovine C. psittaci strain POMP, and two possessed surface-exposed, trypsin-sensitive sites. The POMPs were dependent on disulfide bonds for their maintenance in sodium lauryl sarcosine-and sodium dodecyl sulfate-insoluble complexes but did not appear to be interpeptide disulfide bond cross-linked. The putative POMPs were found to be synthesized during the late phase of the chlamydial developmental cycle, cotemporally with the cysteine-rich doublet periplasmic proteins.The cell envelope structure of Chlamydia is similar to that of other gram-negative bacteria, with an outer membrane (OM) containing lipopolysaccharide, a periplasm, and an inner membrane. However, two envelope features are unique to chlamydiae: an apparent lack of or deficiency in peptidoglycan and the presence of disulfide-bond-cross-linked proteins in the OM and the periplasm (reviewed in reference 15). Nevertheless, the infectious elementary body (EB) form of chlamydiae, but not the dividing reticulate body (RB) form, is osmotically stable, and chlamydiae are sensitive to -lactams and D-cycloserine. The sensitivity of chlamydiae to peptidoglycan synthesis-inhibiting drugs in the possible absence of peptidoglycan has been termed the chlamydial anomaly by Moulder (29). The scope of the anomaly has been expanded by the recent sequencing of the genomes of several chlamydial strains (18,35,38), revealing the presence of what has been thought to be all of the genes required for peptidoglycan synthesis (7). Ghuysen and Goffin (11) proposed a solution to the anomaly, suggesting that chlamydiae use their peptidoglycan genes to synthesize a glycanless wall polymer whose synthesis is penicillin sensitive. Three key points of their proposal are as follows: (i) the predicted amino acid sequence of the three chlamydial penicillinbinding proteins suggests that they are capable of carrying out cross-linking transpeptidase reactions but are incapable of transglycosylating N-acetylglucosamine-N-acetylmuramic acid disaccharides into a glycan polymer; (ii) potential chlamydial N-acetylmuramoyl-L-alanine amidases cleave cross-linked peptidyl polymers from the disaccharide subunits; and (iii) the disaccharide subunits, as part of lipid II, serve strictly as carriers and therefore do not accumulate in stoichiometric amounts. Ghuysen and Goffin (11) further speculated that the glycanless polymer may be covalently linked to lipoproteins in the inner membrane or OM or to a highly dis...