23di-GMP, biofilm 2 24 Abstract
25Recent work has revealed that Clostridioides difficile, a major cause of nosocomial diarrheal 26 disease, exhibits phenotypic heterogeneity within a clonal population as a result of phase 27 variation. Many C. difficile strains representing multiple ribotypes develop two colony 28 morphotypes, termed rough and smooth, but the biological implications of this phenomenon 29 have not been explored. Here, we examine the molecular basis and physiological relevance 30 of the distinct colony morphotypes produced by this bacterium. We show that C. difficile 31 reversibly differentiates into rough and smooth colony morphologies, and that bacteria 32 derived from the isolates display opposing surface and swimming motility behaviors. We
33identified an atypical phase-variable signal transduction system consisting of a histidine 34 kinase and two response regulators, named herein CmrRST, which mediates the switch in 35 colony morphology and motility behaviors. The CmrRST-regulated surface motility is 36 independent of Type IV pili, suggesting a novel mechanism of surface expansion in C.
37difficile. Microscopic analysis of cell and colony structure indicates that CmrRST promotes 38 the formation of elongated bacteria arranged in bundled chains, which may contribute to 39 bacterial migration. In a hamster model of acute C. difficile disease, colony morphology 40 correlates with virulence, and the CmrRST system is required for disease development.
41Furthermore, we provide evidence that CmrRST phase varies during infection, suggesting 42 that the intestinal environment impacts the proportion of CmrRST-expressing C. difficile.
43Our findings indicate that C. difficile employs phase variation of the CmrRST signal 44 transduction system to generate phenotypic heterogeneity during infection, with 45 concomitant effects on bacterial physiology and pathogenesis. 46 3 47 Significance Statement 48 Phenotypic heterogeneity within a genetically clonal population allows many mucosal 49 pathogens to survive within their hosts, balancing the need to produce factors that 50 promote colonization and persistence with the need to avoid the recognition of those 51 factors by the host immune system. Recent work suggests that the human intestinal 52 pathogen Clostridium difficile employs phase variation during infection to generate a 53 heterogeneous population differing in swimming motility, toxin production, and more. 54 This study identifies a signal transduction system that broadly impacts C. difficile 55 physiology and behavior in vitro and in an animal model. Phase variation of this system 56 is therefore poised to modulate the coordinated expression of multiple mechanisms 57 influencing C. difficile disease development. 4 58 59Phenotypic heterogeneity within bacterial populations is a widely established 60 phenomenon that allows the population to survive sudden environmental changes (1-3).
61Heterogeneity serves as a "bet-hedging" strategy such that a subpopulation can persist 62 and propagate an advantageo...